Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0201 |
Symbol | pcnB |
ID | 6486780 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 216025 |
End bp | 217338 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642735638 |
Product | poly(A) polymerase I |
Protein accession | YP_002039420 |
Protein GI | 194446356 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000171206 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATTA TCCCGCGTGA ACAGCACGCT ATCTCCCGCA AAGATATCAG TGAAAATGCC CTCAAGGTAC TGTACAGGCT GAACAAAGCG GGCTATGAAG CCTACCTGGT CGGCGGCGGC GTCCGCGATC TCCTGCTCGG TAAAAAGCCG AAGGATTTCG ACGTGACCAC CAACGCAACA CCGGATCAGG TACGGAAATT ATTCCGCAAT TGCCGTCTGG TGGGGCGTCG TTTCCGCCTG GCTCACGTGA TGTTTGGCCC GGAAATTATC GAAGTGGCAA CGTTTCGTGG TCATCATGAA GGCAGTGAAA GCGACCGTAC GACCTCCCAG CGTGGGCAAA ACGGTATGCT GCTGCGCGAC AACATCTTCG GTTCTATCGA AGAAGATGCC CAGCGCCGCG ATTTCACCAT CAACAGCCTT TACTACAGCG TGGCGGATTT TACTGTGCGC GATTACGTCG GCGGGATGCA GGATCTGCAA GAAGGCGTGA TTCGCCTGAT CGGCAATCCG GAAACGCGCT ACCGCGAAGA TCCGGTTCGA ATGCTGCGCG CCGTGCGTTT CGCTGCGAAG CTCAATATGC GTATCAGCCC TGAAACGGCT GAGCCAATCC CGCGTCTGGC AACCTTGCTA AACGACATTC CTCCCGCGCG CCTGTTCGAA GAGTCGCTGA AGCTGTTGCA GGCGGGGAAC GGTTATGAAA CCTATCAACA ACTGCGGGAA TACCACCTCT TCCAGCCGTT GTTTCCTACC ATTACGCGTT ATTTCACCGA AAACGGCGAC AGCGCAATGG AACGCATCAT TGCACAGGTG TTGAAGAATA CGGATAACCG CATCCGTAAC GAGATGCGCG TTAACCCGGC GTTTTTGTTT GCCGCCATGT TCTGGTATCC GCTGCTGGAG ATGGCGCAAA AAATCGCTCA GGAGAGCGGC CTGGCCTATT ACGATGCTTT CGCGCTGGCC ATGAATGACG TGCTGGATGA AGCCTGCCGT TCACTGGCGA TCCCGAAACG CCTTACCACG CTGACCCGTG ATATTTGGCA GCTTCAGTTA CGCATGTCCC GTCGTCAGGG CAAACGCGCC TGGAAGCTGA TGGAACATCC CAAATTCCGC GCCGCGTTTG ATTTGCTGGA GCTGCGCGCT CAGGTGGAAA ATAATACTGA ACTGCAACGT CTGGCGCAGT GGTGGGCCGA GTTTCAGGCT TCCGCGCCGC CGGAACAAAA AGGGATGCTC AACGAGCTGG ACGACGATCC TGCTCCACGC CGCCGTCGTT CACGTCCGCG CAAACGCGCG CCGCGCCGCG AGGGCACCGT ATGA
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Protein sequence | MTIIPREQHA ISRKDISENA LKVLYRLNKA GYEAYLVGGG VRDLLLGKKP KDFDVTTNAT PDQVRKLFRN CRLVGRRFRL AHVMFGPEII EVATFRGHHE GSESDRTTSQ RGQNGMLLRD NIFGSIEEDA QRRDFTINSL YYSVADFTVR DYVGGMQDLQ EGVIRLIGNP ETRYREDPVR MLRAVRFAAK LNMRISPETA EPIPRLATLL NDIPPARLFE ESLKLLQAGN GYETYQQLRE YHLFQPLFPT ITRYFTENGD SAMERIIAQV LKNTDNRIRN EMRVNPAFLF AAMFWYPLLE MAQKIAQESG LAYYDAFALA MNDVLDEACR SLAIPKRLTT LTRDIWQLQL RMSRRQGKRA WKLMEHPKFR AAFDLLELRA QVENNTELQR LAQWWAEFQA SAPPEQKGML NELDDDPAPR RRRSRPRKRA PRREGTV
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