Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0187 |
Symbol | |
ID | 6483607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 203562 |
End bp | 204224 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642735624 |
Product | carbonic anhydrase |
Protein accession | YP_002039406 |
Protein GI | 194445260 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0288] Carbonic anhydrase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.13235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 105 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGACA TAGATACACT CATCAGCAAC AATGCACTAT GGTCAAAAAT GCTGGTGGAA GAGGACCCCG GATTTTTTGA GAAACTGGCG CAAGCGCAAA AACCGCGCTT TCTATGGATT GGATGTTCCG ACAGCCGCGT TCCCGCAGAG CGTTTAACCG GGCTTGAACC GGGCGAATTG TTTGTTCACC GTAATGTGGC TAACCTGGTT ATTCACACCG ATCTGAACTG TCTCTCCGTG GTTCAGTATG CGGTAGATGT TCTGGAAGTT GAGCATATTA TCATTTGCGG CCACTCCGGT TGCGGCGGTA TCAAGGCTGC GGTAGAAAAC CCTGAGCTGG GCTTGATTAA TAACTGGCTG CTGCATATCC GCGACATCTG GCTTAAACAT AGCTCGCTGT TGGGAAAAAT GCCCGAAGAG CAACGTCTGG ACGCGCTCTA TGAATTGAAC GTCATGGAAC AGGTCTATAA CCTGGGGCAT TCCACCATTA TGCAGTCAGC GTGGAAACGC GGTCAGAATG TGACCATTCA CGGCTGGGCG TACAGTATCA ATGATGGCCT GCTGCGCGAT CTTGACGTCA CCGCCACCAA CAGAGAAACG CTGGAGAACG GCTATCATAA GGGTATTTCC GCCCTAAGTC TGAAATACAT TCCCCACCAA TAA
|
Protein sequence | MKDIDTLISN NALWSKMLVE EDPGFFEKLA QAQKPRFLWI GCSDSRVPAE RLTGLEPGEL FVHRNVANLV IHTDLNCLSV VQYAVDVLEV EHIIICGHSG CGGIKAAVEN PELGLINNWL LHIRDIWLKH SSLLGKMPEE QRLDALYELN VMEQVYNLGH STIMQSAWKR GQNVTIHGWA YSINDGLLRD LDVTATNRET LENGYHKGIS ALSLKYIPHQ
|
| |