Gene SNSL254_A0186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0186 
Symbolhpt 
ID6484846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp202968 
End bp203504 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content50% 
IMG OID642735623 
Producthypoxanthine phosphoribosyltransferase 
Protein accessionYP_002039405 
Protein GI194443622 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0634] Hypoxanthine-guanine phosphoribosyltransferase 
TIGRFAM ID[TIGR01203] hypoxanthine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.186171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones105 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATA CTGTTGAAGT CATGATCCCC GAAGCGGAGA TCAAAGCACG TATTGCCGAG 
CTGGGTCGTC AGATTACCGA ACGTTATAAA GACAGCGGCA GTGAAATGGT GCTGGTAGGT
CTGTTGCGTG GCTCATTTAT GTTTATGGCG GACCTGTGCC GTGAAGTTCA GGTTCCTCAT
GAAGTCGATT TTATGACCGC CTCCAGTTAT GGTAGCGGCA TGTCCACCAC TCGCGACGTG
AAAATCCTCA AAGATCTGGA TGAGGATATT CGTGGTAAAG ACGTGCTGAT TGTCGAAGAC
ATTATTGATT CCGGTAATAC GCTGTCGAAG GTCCGTGAAA TCCTGGGCCT GCGCGAGCCG
AAATCGCTGG CGATTTGTAC GCTGCTGGAT AAACCTTCTC GCCGCGAAGT GGACGTGCCG
GTTGAGTTCG TTGGCTTTTC GATTCCGGAC GAATTTGTAG TCGGTTACGG TATCGACTAC
GCTCAGCGTT ATCGCCATCT ACCGTATGTT GGTAAAGTGG TGCTGCTGGA CGAGTAA
 
Protein sequence
MKHTVEVMIP EAEIKARIAE LGRQITERYK DSGSEMVLVG LLRGSFMFMA DLCREVQVPH 
EVDFMTASSY GSGMSTTRDV KILKDLDEDI RGKDVLIVED IIDSGNTLSK VREILGLREP
KSLAICTLLD KPSRREVDVP VEFVGFSIPD EFVVGYGIDY AQRYRHLPYV GKVVLLDE