Gene SNSL254_A0177 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0177 
Symbol 
ID6483086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp192292 
End bp193305 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content56% 
IMG OID642735614 
Product2-keto-3-deoxygluconate permease 
Protein accessionYP_002039396 
Protein GI194443566 
COG category 
COG ID 
TIGRFAM ID[TIGR00793] 2-keto-3-deoxygluconate transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000564113 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones106 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTGAAT ATAATCGTTA TGATTTTATT CAATCACAAC AAGCAACAGG CGGTAAGACC 
ATGAACATCA AAAAGGCAAT AGAGCGCGTA CCCGGCGGCA TGATGGTCGT ACCGCTCGTT
ATTGGCGCAG TCATTAACAC CTTCGCTCCA CAGGCGCTTG AGATCGGCGG TTTTACCACC
GCCTTATTTA AAAACGGCGC GGCGCCGCTG ATTGGCGCTT TTCTGCTGTG TATGGGAGCC
GGTATCAGTG TGAAAGCCGC GCCCCAGGCG TTATTGCAGG GCGGGACGAT TACGCTCACT
AAGTTGCTTG TCGCCATCGG CATTGGCCTG GGCGTGGAGC ATCTTTTCGG CGCGGAGGGT
ATTTTTGGTC TGAGCGGCGT GGCGATTATC GCGGCGATGA GCAATTCGAA TGGCGGACTT
TATGCTGCGC TGGTAGGCGA ATTCGGCAAT GAGCGCGACG TCGGCGCTAT CTCTATTTTG
TCTCTTAATG ATGGCCCTTT CTTTACGATG ATTGCGCTGG GCGCGGCAGG GATGGCGAAC
ATTCCCATTA TGGCGCTGGT GGCGGTGCTG GTTCCGCTGG TTGTCGGCAT GATCCTCGGC
AATCTTGATC CTCATATGCG CGATTTTTTG ACCAAAGGCG GCCCGCTGCT CATTCCTTTC
TTTGCTTTTG CGCTGGGGGC GGGCATCAAC CTGGAAATGT TACTGCAAGG CGGACTTGCC
GGAATTCTGC TCGGCGTGCT GACAACGTTC GTTGGCGGTT TCTTTAATAT TCGCGCAGAT
CGTCTGGTTG GCGGAACTGG CATTGCCGGG GCGGCGGCCT CCAGCACCGC GGGTAATGCC
GTTGCGACGC CGCTGGCTAT TGCGCAGGCC GACCCTTCGC TCGCCGAGGT GGCCGCTGCT
GCCGCTCCGC TGATTGCCGC CTCGGTGATC ACCACGGCAA TCCTGACGCC AGTGTTGACC
TCCTGGGTTG CAAAAAAACA GGCGCGTCAG GCTTCTTTGG AGAAAAACGC ATGA
 
Protein sequence
MIEYNRYDFI QSQQATGGKT MNIKKAIERV PGGMMVVPLV IGAVINTFAP QALEIGGFTT 
ALFKNGAAPL IGAFLLCMGA GISVKAAPQA LLQGGTITLT KLLVAIGIGL GVEHLFGAEG
IFGLSGVAII AAMSNSNGGL YAALVGEFGN ERDVGAISIL SLNDGPFFTM IALGAAGMAN
IPIMALVAVL VPLVVGMILG NLDPHMRDFL TKGGPLLIPF FAFALGAGIN LEMLLQGGLA
GILLGVLTTF VGGFFNIRAD RLVGGTGIAG AAASSTAGNA VATPLAIAQA DPSLAEVAAA
AAPLIAASVI TTAILTPVLT SWVAKKQARQ ASLEKNA