| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0167 |
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| Symbol | lpdA |
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| ID | 6484930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 182790 |
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| End bp | 184214 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642735604 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_002039386 |
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| Protein GI | 194445429 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 112 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACTG AAATCAAAAC TCAGGTCGTG GTACTTGGGG CGGGCCCGGC AGGCTATTCT
GCCGCTTTCC GTTGCGCTGA TTTAGGTCTG GAAACCGTAA TTGTAGAACG CTACAACACC
CTTGGCGGTG TTTGTCTGAA CGTCGGCTGT ATCCCTTCTA AAGCGCTGCT GCACGTAGCA
AAAGTTATCG AAGAAGCCAA AGCGCTGGCT GAACACGGTA TCGTCTTCGG TGAGCCGAAA
ACTGATATCG ACAAGATTCG TACCTGGAAA GAGAAAGTGA TCACGCAGCT GACCGGCGGT
CTGGCGGGTA TGGCCAAAGG CCGTAAAGTG AAAGTGGTCA ACGGTCTGGG TAAATTCACC
GGGGCTAATA CCCTGGAAGT GGAAGGCGAA AATGGCAAAA CCGTGATCAA CTTCGACAAC
GCGATCATCG CGGCGGGTTC TCGTCCGATC CAATTACCGT TTATTCCGCA TGAAGACCCG
CGCGTATGGG ATTCTACCGA CGCTCTGGAA CTGAAAGAAG TGCCGAAGCG TATGCTGGTC
ATGGGCGGCG GTATCATCGG TCTGGAAATG GGTACCGTAT ACCACGCGCT GGGTTCAGAG
ATCGACGTGG TTGAAATGTT CGACCAGGTT ATCCCGGCGG CTGATAAAGA TATCGTTAAA
GTCTTCACCA AGCGCATCAG CAAGAAATTC AACCTGATGC TGGAAACCAA AGTGACTGCC
GTTGAAGCGA AAGAAGACGG TATCTACGTT TCGATGGAAG GCAAAAAAGC CCCGGCTGAA
GCGCAGCGTT ATGATGCGGT TCTGGTGGCG ATCGGTCGTG TGCCGAACGG TAAAAACCTC
GACGCGGGCA AAGCAGGCGT GGAAGTTGAC GACCGTGGCT TTATCCGCGT GGACAAACAG
CTGCGCACCA ACGTGCCGCA CATCTTCGCT ATCGGCGATA TCGTCGGTCA GCCGATGCTG
GCGCACAAAG GCGTTCACGA AGGTCACGTT GCCGCTGAAG TTATCGCTGG TAAGAAACAC
TACTTCGATC CGAAGGTTAT CCCGTCTATC GCGTACACCG AGCCAGAAGT GGCATGGGTT
GGCCTGACCG AGAAAGAAGC GAAAGAAAAA GGCATCAGCT ATGAAACCGC CACCTTCCCG
TGGGCAGCTT CTGGCCGTGC TATCGCTTCT GACTGCGCAG ACGGTATGAC CAAACTGATT
TTCGACAAAG AATCTCACCG CGTGATCGGC GGGGCGATTG TCGGTACCAA CGGCGGCGAG
CTGCTGGGTG AAATCGGTCT GGCGATCGAA ATGGGCTGTG ATGCGGAAGA CATCGCGCTG
ACCATTCATG CGCACCCGAC GCTGCACGAG TCCGTCGGTC TGGCTGCTGA AGTGTTCGAA
GGTAGTATTA CCGACCTGCC GAACCCGAAA GCGAAGAAGA AATAA
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| Protein sequence | MSTEIKTQVV VLGAGPAGYS AAFRCADLGL ETVIVERYNT LGGVCLNVGC IPSKALLHVA
KVIEEAKALA EHGIVFGEPK TDIDKIRTWK EKVITQLTGG LAGMAKGRKV KVVNGLGKFT
GANTLEVEGE NGKTVINFDN AIIAAGSRPI QLPFIPHEDP RVWDSTDALE LKEVPKRMLV
MGGGIIGLEM GTVYHALGSE IDVVEMFDQV IPAADKDIVK VFTKRISKKF NLMLETKVTA
VEAKEDGIYV SMEGKKAPAE AQRYDAVLVA IGRVPNGKNL DAGKAGVEVD DRGFIRVDKQ
LRTNVPHIFA IGDIVGQPML AHKGVHEGHV AAEVIAGKKH YFDPKVIPSI AYTEPEVAWV
GLTEKEAKEK GISYETATFP WAASGRAIAS DCADGMTKLI FDKESHRVIG GAIVGTNGGE
LLGEIGLAIE MGCDAEDIAL TIHAHPTLHE SVGLAAEVFE GSITDLPNPK AKKK
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