Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0162 |
Symbol | |
ID | 6484771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 173591 |
End bp | 174997 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642735599 |
Product | Na+/galactoside symporter |
Protein accession | YP_002039381 |
Protein GI | 194446380 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 93 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAAGG GCAGACTTTC GGTAAGAGAG AAAATCGGGT ATGGCATGGG TGACGCCGGA TGTAACATTA TTTTTGGCGC TATCATGCTG TTTGTTAATT ACTTTTATAC GGATATTTTT GGTCTTGCCC CGGCGTTAGT CGGTGTTTTA CTCCTTTCAG TACGCGTTAT CGATGCCGTT ACCGATCCGG TGATGGGCGC GCTTGCCGAT CGTACCCAAA GTAAATATGG TCGTTTCCGC CCCTGGCTAC TGTGGATTGC ATTTCCCTAC GCGCTGTTCA GCGTTCTGAT GTTCACGACG CCGGACTGGG GCTATAACAG CAAAGTTATC TATGCCTTCG TCACCTATTT TCTGCTTTCC GTGACCTATA CCGCCATCAA TATTCCCTAT TGCTCACTGG GCGGCGTGAT CACCAACGAT CCAAAAGAGC GCGTGGCCTG TCAGGCTTAT CGCTTCGTGT TAGTCGGCAT CGCGACGCTG TTGCTATCGT TAACGCTATT GCCGATGGTG GACTGTTTTG GCGGCGGCGA CAAAGCCAAA GGCTATCAGT TGGCGATGAC CGTGCTGGCG ATTATCGGCA TGGGTATGTT TCTGTTCTGC TTTGCCAGCG TCCGCGAACG CGTCCGCCCT GCCGTTCCGA CGCACGATGA TATGAAGAAT GATTTCAAAG ATGTGTGGAA AAACGATCAA TGGGTACGCA TTCTGCTATT GACCTTATGT AACGTCTGCC CGGGGTTTAT CCGTATGGCA GCGACCATGT ATTACGTCAC CTGGGTGATG GGACAAAGCA CCCATTTCGC TACGCTTTTT ATTAGTCTTG GCGTGGTCGG TATGATGATC GGCAGTATGC TGGCAAAAGT CTTAACCGAT CGCTGGTGTA AATTGAAGGT ATTTTTCTGG ACCAATATTG CGCTGGCGAT TTTCTCCTGC GCGTTCTATT TCTTTGATCC GAAAGCCACC GTGATGATAG TGGCGCTCTA CTTCCTGCTC AATATTCTGC ATCAGATCCC TTCCCCGTTA CACTGGTCGC TGATGGCGGA CGTCGATGAT TACGGCGAAT GGAAAACCGG CAAACGCATT ACCGGTATTA GCTTCTCCGG TAACCTGTTC TTCCTCAAGC TGGGCCTGGC GATTGCCGGG GCGATGGTCG GCTTTTTGCT CTCCTGGTAC GGTTATGACG CCAGCGCTAA AGCGCAAAGC GCCTCGGCGA TGAACGGTAT TATGCTGTTG TTTACCGTTA TCCCCGGCGT TGGCTATCTG ATTACCGCAG GCGTGGTACG TCTGCTGAAA GTTGACCGTG AACTGATGAA AAAAATCCAG GACGATTTGG AAAAACGTCG CACTAATTAC CGCGAATTGA GTGAGTTGCA GGAGCTCAAC GCCGCTGAAA GCGTAAGGAA AGCCTGA
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Protein sequence | MDKGRLSVRE KIGYGMGDAG CNIIFGAIML FVNYFYTDIF GLAPALVGVL LLSVRVIDAV TDPVMGALAD RTQSKYGRFR PWLLWIAFPY ALFSVLMFTT PDWGYNSKVI YAFVTYFLLS VTYTAINIPY CSLGGVITND PKERVACQAY RFVLVGIATL LLSLTLLPMV DCFGGGDKAK GYQLAMTVLA IIGMGMFLFC FASVRERVRP AVPTHDDMKN DFKDVWKNDQ WVRILLLTLC NVCPGFIRMA ATMYYVTWVM GQSTHFATLF ISLGVVGMMI GSMLAKVLTD RWCKLKVFFW TNIALAIFSC AFYFFDPKAT VMIVALYFLL NILHQIPSPL HWSLMADVDD YGEWKTGKRI TGISFSGNLF FLKLGLAIAG AMVGFLLSWY GYDASAKAQS ASAMNGIMLL FTVIPGVGYL ITAGVVRLLK VDRELMKKIQ DDLEKRRTNY RELSELQELN AAESVRKA
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