| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0155 |
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| Symbol | |
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| ID | 6483238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 166908 |
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| End bp | 168110 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642735592 |
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| Product | type IV pilin biogenesis protein |
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| Protein accession | YP_002039374 |
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| Protein GI | 194444325 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000866014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 90 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTTA AACAGCTCTG GCGCTGGCAA GGCGTTAACG ATAAAGGTCA ACTGGAACAA
GACGTTGTAT GGGCGGACAA TCGTCTGGCG CTGATCATCA CCCTGCAACA TCAGCGCATT
ATGCCGCTTC GCATCAAGCG CATGGGCGTT AACGCCGCAC TGTGGAAAGA AGAGCAAAGC
GCTGAAATTA TTCATCAGTT GGCCACGCTC ATTCATGCCG GGCTGACGCT TTCTGAAGGG
CTGGAACTCC TTGCGAAACA GCATCCACAC CGACAATGGC AAGCGCTGTT GCGCACGCTG
GCTCACGAGC TTGAACAGGG CGTCCCTTTT TCCAGCGCAT TAGTCTCCTG GCCGCAGGTA
TTTCCGCCGC TCTACCAGAC GATGATCCGC ACCGGAGAAC TGACCGGCAA ACTGGCCGAA
TGCTGCTTTG AACTGGCCCG TCAGCAAAAA GCGCAACGGC AGATTACGGT TAGCGTGAAA
AAGGCGCTGC GCTATCCCGC CATTATTCTG ACAATGGCCG CCCTGGTCGT TTTCGCCATG
CTGCACTTTG TTCTGCCGGA ATTTGCCGCC ATTTACCGTA GCTTCAATAC CCCGCTCCCT
CTTCTGACGC GCGGTATTAT CGCGATAGCG CAATGGGGGG CGGCATGGGG TTGGCTCATC
TTGTTCCTGA CGATGCTCAT TGCTATCGCT CACCGCAGGG TAAAACAAAA GCCGTCCTGG
CAAGCGCAGC GGCAGCGTCT TCTGCTACGG CTTCCCGTTA TGGGTCGCCT GATAAGAGGC
CAGAAACTAG CGCAAATATT CACCGTACTG GCATTAACCC AAAGCGCAGG CATTCCTTTT
CTTCAGGGAC TGGAAAGCGC TATCGAGAGT CTCGGCTGCC CTTACTGGTC ACAGCGTTTA
ACGCAGGTAC ATCAGGAGAT CGCCGCGGGC AATCCGGTCT GGTTGGCGCT AAAAAATACC
CAGGAATTTA GTCCGCTATG CCTGCAACTG GTCAGAACGG GCGAAGCGTC CGGCTCACTC
GATATCATGC TGCATAACCT TGCCCGTCAC CACAGTGAAA CTACGCTGGC GCTGGCCGAT
AATCTGGCGT CGCTGTTGGA ACCGGCGTTA TTGATCATCA CCGGCTTAAT TATCGGTACG
CTGGTGGTGG CGATGTATTT GCCGATTTTT CATCTGGGAG ACGCGATGAG CGGGATGGGA
TAA
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| Protein sequence | MSVKQLWRWQ GVNDKGQLEQ DVVWADNRLA LIITLQHQRI MPLRIKRMGV NAALWKEEQS
AEIIHQLATL IHAGLTLSEG LELLAKQHPH RQWQALLRTL AHELEQGVPF SSALVSWPQV
FPPLYQTMIR TGELTGKLAE CCFELARQQK AQRQITVSVK KALRYPAIIL TMAALVVFAM
LHFVLPEFAA IYRSFNTPLP LLTRGIIAIA QWGAAWGWLI LFLTMLIAIA HRRVKQKPSW
QAQRQRLLLR LPVMGRLIRG QKLAQIFTVL ALTQSAGIPF LQGLESAIES LGCPYWSQRL
TQVHQEIAAG NPVWLALKNT QEFSPLCLQL VRTGEASGSL DIMLHNLARH HSETTLALAD
NLASLLEPAL LIITGLIIGT LVVAMYLPIF HLGDAMSGMG
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