Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0141 |
Symbol | murC |
ID | 6483462 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 152925 |
End bp | 154400 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642735579 |
Product | UDP-N-acetylmuramate--L-alanine ligase |
Protein accession | YP_002039361 |
Protein GI | 194445444 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0846069 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATACAC AACAACTGGC AAAACTGCGT TCCATCGTGC CCGAAATGCG TCGTGTTCGG CACATTCACT TTGTCGGCAT CGGTGGTGCT GGTATGGGCG GTATTGCCGA AGTTCTGGCC AATGAAGGGT ATCAGATCAG TGGTTCCGAT TTAGCGCCGA ATCCGGTGAC CCAGCAGTTG ACGAGCCTGG GGGCGACGAT TTTCTTTAAC CATCGTCCGG AAAATGTGCG TGATGCCAGC GTGGTCGTCG TTTCCAGCGC AATTTCCGCG GATAACCCGG AAATTGTCGC GGCGCATGAA GCGCGTATTC CGGTTATTCG CCGTGCGGAA ATGCTGGCGG AACTGATGCG TTTTCGCCAC GGCATCGCCA TTGCCGGGAC GCACGGAAAA ACCACAACGA CCGCGATGGT GTCCAGTATT TATGCCGAAG CGGGGCTGGA CCCGACTTTC GTGAATGGCG GACTGGTGAA AGCCGCAGGC GTTCATGCGC GTCTGGGCCA TAGTCGTTAC CTGATTGCCG AGGCAGATGA GAGCGACGCA TCCTTCCTGC ATTTGCAGCC GATGGTTGCG ATCGTCACCA ACATCGAAGC CGACCATATG GATACCTATC ATGGCGACTT TGAAAATTTA AAGCAGACGT TTATTAACTT CCTGCATAAC CTGCCGTTCT ACGGTCGCGC GGTAATGTGC GTCGACGATC CGGTCATCCG CGAGTTGCTG CCGCGGGTGG GGCGTCAGAC CACGACGTAT GGCTTTAGCG AGGATGCTGA CGTCCGTGTA GAAGATTATC AGCAGATAGG GCCGCAGGGG CACTTTACGC TGTTGCGCCA GGGAATGCCG GATCTGCATG TCACGTTGAA TGCGCCGGGT CGCCACAATG CCCTGAATGC CGCCGCGGCA GTGGCGGTAG CGACCGAAGA AGGCATCGAC GATGACGCTA TCCTGCGCGC GCTGGAAAGC TTCCAGGGGA CCGGGCGTCG TTTTGACTTC CTCGGCGAGT TCCCGCTTGA GCCGGTGAAT GGTAAAGCCG GGACGGCGAT GCTGGTGGAT GACTATGGCC ATCATCCGAC CGAAGTAGAC GCCACCATTA AAGCTGCGCG AGCAGGGTGG CCGGATAAAA ACCTGGTGAT GCTGTTTCAG CCGCACCGTT ACACGCGCAC GCGCGATCTG TATGACGATT TCGCCAATGT GCTGACCCAG GTCGATGCGC TGCTGATGCT GGACGTTTAC CCGGCGGGCG AAGCGCCGAT TCCGGGCGCG GATAGCCGTT CTTTATGTCG TACGATTCGT AATCGGGGAA AAATTGACCC GATTCTGGTT TCCGATCCGG CTCAGGTTGC GACAATGTTA GCGCCGGTGC TGACGGGTAA CGACTTGATA TTAGTGCAAG GCGCAGGAAA TGTTGGCAAA ATTGCGCGTT ACTTATCTGA AATCAAGCTG AAGCCGCAAA TCCAGGAGGA AGAGCAACAT GGCTGA
|
Protein sequence | MNTQQLAKLR SIVPEMRRVR HIHFVGIGGA GMGGIAEVLA NEGYQISGSD LAPNPVTQQL TSLGATIFFN HRPENVRDAS VVVVSSAISA DNPEIVAAHE ARIPVIRRAE MLAELMRFRH GIAIAGTHGK TTTTAMVSSI YAEAGLDPTF VNGGLVKAAG VHARLGHSRY LIAEADESDA SFLHLQPMVA IVTNIEADHM DTYHGDFENL KQTFINFLHN LPFYGRAVMC VDDPVIRELL PRVGRQTTTY GFSEDADVRV EDYQQIGPQG HFTLLRQGMP DLHVTLNAPG RHNALNAAAA VAVATEEGID DDAILRALES FQGTGRRFDF LGEFPLEPVN GKAGTAMLVD DYGHHPTEVD ATIKAARAGW PDKNLVMLFQ PHRYTRTRDL YDDFANVLTQ VDALLMLDVY PAGEAPIPGA DSRSLCRTIR NRGKIDPILV SDPAQVATML APVLTGNDLI LVQGAGNVGK IARYLSEIKL KPQIQEEEQH G
|
| |