| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0109 |
|---|
| Symbol | araA |
|---|
| ID | 6483191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 119861 |
|---|
| End bp | 121363 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642735551 |
|---|
| Product | L-arabinose isomerase |
|---|
| Protein accession | YP_002039333 |
|---|
| Protein GI | 194446528 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2160] L-arabinose isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 0.309204 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATTT TTGATAATTA TGAAGTATGG TTTGTGATTG GCAGCCAGCA TTTGTATGGC
GCAGAAACCC TGCGTCAGGT CACCCAACAT GCCGAGCATG TGGTCAACGC GCTGAATACC
GAAGCCAAAC TGCCATGTAA ACTGGTATTA AAACCGCTGG GCACCTCGCC GGATGAGATT
ACCGCCATTT GTCGTGACGC CAATTATGAC GATCGCTGCG CAGGGCTGGT GGTCTGGCTG
CACACCTTCT CCCCGGCCAA AATGTGGATC AACGGGCTGA GTATCCTTAA CAAACCACTA
CTGCAATTCC ATACCCAATT TAACGCCGCC CTGCCGTGGG ACAGCATTGA TATGGACTTT
ATGAACCTGA ACCAGACTGC GCACGGCGGC CGCGAGTTCG GTTTTATCGG CGCGCGGATG
CGTCAGCAGC ACGCGGTCGT CACTGGCCAC TGGCAGGATA AAGAGGCCCA TACGCGTATC
GGCGCCTGGA TGCGCCAGGC GGTCTCTAAA CAGGATACCC GCCAGCTAAA AGTCTGCCGC
TTCGGCGACA ATATGCGTGA AGTCGCAGTG ACTGACGGTG ATAAAGTGGC CGCGCAAATC
AAATTTGGCT TTTCGGTCAA TACCTGGGCG GTCGGCGATC TGGTGCAGGT GGTGAATTCT
ATCGGCGACG GCGATATCAA CGCTCTGATT GACGAGTATG AAAGCAGCTA TACCCTGACG
CCCGCCACCC AAATCCACGG CGATAAACGC CAGAACGTGC GGGAGGCGGC GCGTATTGAA
CTCGGTATGA AGCGTTTCCT GGAACAGGGC GGCTTCCACG CATTCACTAC TACCTTTGAA
GATTTACACG GTCTGAAACA GCTTCCGGGT CTGGCCGTAC AGCGTCTGAT GCAGCAAGGC
TACGGCTTTG CGGGCGAAGG CGACTGGAAA ACCGCCGCTC TGCTTCGCAT TATGAAAGTG
ATGTCAACCG GTCTGCAGGG CGGCACCTCA TTTATGGAGG ATTACACCTA CCACTTCGAG
AAAGGCAACG ATCTGGTGCT CGGCTCGCAC ATGCTGGAAG TGTGTCCGTC CATCGCGGTG
GAAGAGAAAC CGATCCTCGA CGTCCAGCAC CTCGGCATTG GCGGCAAGGA AGATCCGGCG
CGTTTGATTT TCAATACCCA AACCGGCCCG GCGATCGTCG CCAGCCTGAT CGACCTCGGC
GATCGTTATC GCCTGCTGGT CAACTGCATT GACACCGTAA AAACGCCGCA CTCCCTGCCG
AAACTGCCGG TGGCTAACGC GCTGTGGAAG GCGCAGCCGG ATCTGCCGAC CGCCTCCGAA
GCGTGGATTC TGGCTGGCGG CGCGCACCAT ACCGTCTTCA GCCACGCGCT GGATCTGAAC
GATATGCGCC AGTTTGCAGA AATACACGAT ATCGAAATCG CGGTGATTGA TAACGATACC
CATCTGCCGG CCTTTAAGGA CGCGCTGCGC TGGAACGAGG TGTATTACGG GTTCAAACGT
TAA
|
|---|
| Protein sequence | MTIFDNYEVW FVIGSQHLYG AETLRQVTQH AEHVVNALNT EAKLPCKLVL KPLGTSPDEI
TAICRDANYD DRCAGLVVWL HTFSPAKMWI NGLSILNKPL LQFHTQFNAA LPWDSIDMDF
MNLNQTAHGG REFGFIGARM RQQHAVVTGH WQDKEAHTRI GAWMRQAVSK QDTRQLKVCR
FGDNMREVAV TDGDKVAAQI KFGFSVNTWA VGDLVQVVNS IGDGDINALI DEYESSYTLT
PATQIHGDKR QNVREAARIE LGMKRFLEQG GFHAFTTTFE DLHGLKQLPG LAVQRLMQQG
YGFAGEGDWK TAALLRIMKV MSTGLQGGTS FMEDYTYHFE KGNDLVLGSH MLEVCPSIAV
EEKPILDVQH LGIGGKEDPA RLIFNTQTGP AIVASLIDLG DRYRLLVNCI DTVKTPHSLP
KLPVANALWK AQPDLPTASE AWILAGGAHH TVFSHALDLN DMRQFAEIHD IEIAVIDNDT
HLPAFKDALR WNEVYYGFKR
|
|---|
| |