Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0076 |
Symbol | |
ID | 6483931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 83992 |
End bp | 85263 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642735519 |
Product | crotonobetainyl-CoA:carnitine CoA-transferase |
Protein accession | YP_002039301 |
Protein GI | 194442451 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.525177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTGT GCTTATCCGG CCTACATACC GCAAAAAATG CCAGGAGAAA AATGATGAAT CATTTACCAA TGCCAACCTT TGGCCCGCTT GCTGGGGTAC GCGTTGTTTT TTCGGGAATC GAAATCGCCG GTCCGTTCGC CGGACAGATG TTCGCCGAAT GGGGCGCCGA GGTTATCTGG ATTGAAAACG TCGCATGGGC CGATACCATC CGCGTACAGC CTAACTACCC GCAGCTCTCA CGCCGCAACC TGCACGCCCT GTCGCTGAAT ATTTTCAAAG ATGAAGGTCG GGAAGCGTTT CTGAAACTCA TGGAAACCAC CGATATTTTC ATTGAAGCCA GTAAAGGCCC GGCCTTTGCC CGCCGCGGTA TTACTGATGA AGTGCTGTGG GAGCATAACC CGAAACTGGT GATAGCCCAC CTTTCCGGCT TCGGCCAGTA TGGTACCGAG GAGTACACCA ATCTTCCGGC GTATAACACC ATCGCGCAGG CATTCAGTGG TTATCTGATC CAAAACGGCG ACGTTGATCA GCCGATGCCA GCCTTCCCGT ATACCGCCGA TTACTTCTCT GGGATGACCG CGACGACAGC CGCGCTGGCA GCCCTGCACA AAGTACGCGA AACGGGTAAA GGTGAAAGCA TCGATATCGC CATGTACGAA GTGATGCTGC GCATGGGTCA GTACTTCATG ATGGACTACT TCAACGGCGG CGAAATCTGT CCACGTATGA CGAAAGGGAA AGACCCCTAC TACGCCGGTT GCGGCCTGTA TAAATGCGCC GATGGTTACA TCGTCATGGA GTTGGTCGGC ATCACGCAAA TCAACGAGTG TTTTAAAGAT ATTGGCCTGG CCCATATTCT TGGTACGCCG GAAGTTCCGG AAGGCACGCA GCTCATCCAT CGCGTGGAAT GCCCTTACGG CCCGCTCGTC GAAGAGAAAC TGGACGCCTG GCTGGCAACA CACACCATCG CCGACGTTCA GGCGCGTTTT GCTGAGCTGA ATATCGCCTG TGCGAAGGTG CTCACCATTC CGGAACTGGA AGGTAACCCG CAGTACGTTG CCCGCGAATC GATTACTCAG TGGCAAACAA TGGACGGTCG CACCTGTAAA GGGCCGAACA TCATGCCGAA ATTTAAAAAC AACCCGGGGA AAATCTGGCG TGGCATGCCG TCACACGGCA TGGATACCGC CGCCATTCTG AAAAACATTG GTTATAGCGA AGCAGATATT AAGGAACTGG TCGGCAAAGG CCTGGCCAAA GTTGAGGATT AA
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Protein sequence | MALCLSGLHT AKNARRKMMN HLPMPTFGPL AGVRVVFSGI EIAGPFAGQM FAEWGAEVIW IENVAWADTI RVQPNYPQLS RRNLHALSLN IFKDEGREAF LKLMETTDIF IEASKGPAFA RRGITDEVLW EHNPKLVIAH LSGFGQYGTE EYTNLPAYNT IAQAFSGYLI QNGDVDQPMP AFPYTADYFS GMTATTAALA ALHKVRETGK GESIDIAMYE VMLRMGQYFM MDYFNGGEIC PRMTKGKDPY YAGCGLYKCA DGYIVMELVG ITQINECFKD IGLAHILGTP EVPEGTQLIH RVECPYGPLV EEKLDAWLAT HTIADVQARF AELNIACAKV LTIPELEGNP QYVARESITQ WQTMDGRTCK GPNIMPKFKN NPGKIWRGMP SHGMDTAAIL KNIGYSEADI KELVGKGLAK VED
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