Gene SNSL254_A0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0076 
Symbol 
ID6483931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp83992 
End bp85263 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content54% 
IMG OID642735519 
Productcrotonobetainyl-CoA:carnitine CoA-transferase 
Protein accessionYP_002039301 
Protein GI194442451 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.525177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGT GCTTATCCGG CCTACATACC GCAAAAAATG CCAGGAGAAA AATGATGAAT 
CATTTACCAA TGCCAACCTT TGGCCCGCTT GCTGGGGTAC GCGTTGTTTT TTCGGGAATC
GAAATCGCCG GTCCGTTCGC CGGACAGATG TTCGCCGAAT GGGGCGCCGA GGTTATCTGG
ATTGAAAACG TCGCATGGGC CGATACCATC CGCGTACAGC CTAACTACCC GCAGCTCTCA
CGCCGCAACC TGCACGCCCT GTCGCTGAAT ATTTTCAAAG ATGAAGGTCG GGAAGCGTTT
CTGAAACTCA TGGAAACCAC CGATATTTTC ATTGAAGCCA GTAAAGGCCC GGCCTTTGCC
CGCCGCGGTA TTACTGATGA AGTGCTGTGG GAGCATAACC CGAAACTGGT GATAGCCCAC
CTTTCCGGCT TCGGCCAGTA TGGTACCGAG GAGTACACCA ATCTTCCGGC GTATAACACC
ATCGCGCAGG CATTCAGTGG TTATCTGATC CAAAACGGCG ACGTTGATCA GCCGATGCCA
GCCTTCCCGT ATACCGCCGA TTACTTCTCT GGGATGACCG CGACGACAGC CGCGCTGGCA
GCCCTGCACA AAGTACGCGA AACGGGTAAA GGTGAAAGCA TCGATATCGC CATGTACGAA
GTGATGCTGC GCATGGGTCA GTACTTCATG ATGGACTACT TCAACGGCGG CGAAATCTGT
CCACGTATGA CGAAAGGGAA AGACCCCTAC TACGCCGGTT GCGGCCTGTA TAAATGCGCC
GATGGTTACA TCGTCATGGA GTTGGTCGGC ATCACGCAAA TCAACGAGTG TTTTAAAGAT
ATTGGCCTGG CCCATATTCT TGGTACGCCG GAAGTTCCGG AAGGCACGCA GCTCATCCAT
CGCGTGGAAT GCCCTTACGG CCCGCTCGTC GAAGAGAAAC TGGACGCCTG GCTGGCAACA
CACACCATCG CCGACGTTCA GGCGCGTTTT GCTGAGCTGA ATATCGCCTG TGCGAAGGTG
CTCACCATTC CGGAACTGGA AGGTAACCCG CAGTACGTTG CCCGCGAATC GATTACTCAG
TGGCAAACAA TGGACGGTCG CACCTGTAAA GGGCCGAACA TCATGCCGAA ATTTAAAAAC
AACCCGGGGA AAATCTGGCG TGGCATGCCG TCACACGGCA TGGATACCGC CGCCATTCTG
AAAAACATTG GTTATAGCGA AGCAGATATT AAGGAACTGG TCGGCAAAGG CCTGGCCAAA
GTTGAGGATT AA
 
Protein sequence
MALCLSGLHT AKNARRKMMN HLPMPTFGPL AGVRVVFSGI EIAGPFAGQM FAEWGAEVIW 
IENVAWADTI RVQPNYPQLS RRNLHALSLN IFKDEGREAF LKLMETTDIF IEASKGPAFA
RRGITDEVLW EHNPKLVIAH LSGFGQYGTE EYTNLPAYNT IAQAFSGYLI QNGDVDQPMP
AFPYTADYFS GMTATTAALA ALHKVRETGK GESIDIAMYE VMLRMGQYFM MDYFNGGEIC
PRMTKGKDPY YAGCGLYKCA DGYIVMELVG ITQINECFKD IGLAHILGTP EVPEGTQLIH
RVECPYGPLV EEKLDAWLAT HTIADVQARF AELNIACAKV LTIPELEGNP QYVARESITQ
WQTMDGRTCK GPNIMPKFKN NPGKIWRGMP SHGMDTAAIL KNIGYSEADI KELVGKGLAK
VED