Gene SNSL254_A0070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0070 
SymbolcarA 
ID6485349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp75690 
End bp76838 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content55% 
IMG OID642735514 
Productcarbamoyl phosphate synthase small subunit 
Protein accessionYP_002039296 
Protein GI194444919 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0505] Carbamoylphosphate synthase small subunit 
TIGRFAM ID[TIGR01368] carbamoyl-phosphate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTAAGT CAGCGCTATT GGTTCTGGAA GACGGAACCC AGTTTCACGG TCGGGCCATT 
GGGGCAACGG GTTCGGCGGT TGGGGAAGTC GTTTTCAATA CTTCAATGAC CGGTTATCAA
GAAATCCTCA CTGATCCTTC CTATTCCCGC CAAATCGTCA CTCTTACTTA TCCCCATATT
GGTAATGTCG GCACCAATGA AGCCGATGAA GAATCTTCTC AGGTTCATGC GCAAGGTTTA
GTGATTCGCG ATCTGCCGTT GATTGCCAGC AACTTCCGTA ACACCGAAGA CCTCTCTTCT
TACCTGAAAC GCCATAACAT CGTGGCGATT GCCGATATCG ATACCCGCAA GCTGACGCGT
CTGCTGCGTG AGAAAGGCGC ACAGAACGGC TGTATCATTG CAGGCGATAG CCCGGATGCG
AAGCTGGCGC TGGAAAAAGC GAAAGCATTT CCTGGACTGA ACGGTATGGA TCTGGCGAAA
GAAGTGACCA CGGCGGAAAC TTACCGCTGG ACGCAGGGTA GCTGGACGCT GAAAGACGGT
TTACCGGAAG CGAAATCTGA GGATGACCTG CCGTTCCACG TGGTGGCCTA CGATTTTGGC
GCCAAGCGCA ACATTCTACG TATGCTGGTG GATCGCGGCT GCCGCCTGAC GGTGGTGCCA
GCGCAGACCT CTGCTGAAGA GGTGCTGAAA ATGAATCCGG ACGGCATCTT CCTGTCGAAC
GGCCCTGGCG ACCCGGCACC GTGCGACTAC GCCATCGAGG CGATTGAGAA ATTCCTCCAG
ACCGACATTC CTGTGTTCGG CATCTGCCTC GGTCATCAGC TACTGGCGCT GGCGAGCGGT
GCGAAGACCG TTAAGATGAA GTTCGGCCAT CACGGCGGCA ATCATCCGGT AAAAGATATG
GACAGAAACG TGGTGATGAT CACTGCGCAG AACCACGGTT TTGCGGTGGA TGAAGACTCG
CTGCCAGCCA ACCTGCGCGT GACCCACAAG TCGCTGTTCG ACGGCACCCT GCAAGGTATT
CATCGTACCG ACAAACCGGC GTTCAGCTTC CAGGGCCACC CGGAGGCGAG CCCAGGCCCG
CACGATGCGG CGCCGCTGTT CGACCACTTT ATCGAGCTTA TTGAGCAATA CCGTCAGTCC
GCGAAATAA
 
Protein sequence
MIKSALLVLE DGTQFHGRAI GATGSAVGEV VFNTSMTGYQ EILTDPSYSR QIVTLTYPHI 
GNVGTNEADE ESSQVHAQGL VIRDLPLIAS NFRNTEDLSS YLKRHNIVAI ADIDTRKLTR
LLREKGAQNG CIIAGDSPDA KLALEKAKAF PGLNGMDLAK EVTTAETYRW TQGSWTLKDG
LPEAKSEDDL PFHVVAYDFG AKRNILRMLV DRGCRLTVVP AQTSAEEVLK MNPDGIFLSN
GPGDPAPCDY AIEAIEKFLQ TDIPVFGICL GHQLLALASG AKTVKMKFGH HGGNHPVKDM
DRNVVMITAQ NHGFAVDEDS LPANLRVTHK SLFDGTLQGI HRTDKPAFSF QGHPEASPGP
HDAAPLFDHF IELIEQYRQS AK