| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0058 |
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| Symbol | |
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| ID | 6486398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 61785 |
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| End bp | 63443 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642735502 |
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| Product | sensor kinase DpiB |
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| Protein accession | YP_002039284 |
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| Protein GI | 194442739 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3290] Signal transduction histidine kinase regulating citrate/malate metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.736152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.965676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGAAA ATACCGTAAT TAAATATTTA AATACCAATA TGTTTATACG GGAAATTACA
CGCTGGTTTG CCAGACACTC GTTTCAAAAC CGGATATTTC TACTGATCCT GTTTACATCC
ACCATCGTGA TGCTGGCAAT CACCTGGTAT CTGACCGATA TCACGAAAGA ACGCCTGCAT
TATCAGGTGG GCCAACGTGC GCTTATTCAG GCAATGCAAA TATCCGCTAT GCCAGAATTA
GTTGAAGCCG TAGAAGCGCA TGATTTGTCA CGCATCAAAG CGTTGATTGA CCCAATGCGC
TCGTTTTCGG ATGCGACTTA CATTACCGTT GGCAACGAAA AAGGTCAGCG ACTGTATCAC
GTCAACCCGG ATGAGATCGG CAAATATATG GAGGGCGGCG ATAGCGACGA CGCGCTGTAT
AACGCTAAAA GCTACGTATC GGTGCGCAAA GGTTCATTAG GCTCTTCCCT ACGTGGTAAA
TCCCCGATTC AGGACAGTAC CGGTAAAGTC ATCGGTATTG TTTCCGTCGG CTATACTCTG
GAACAGTTGG AGAGCTGGCT TAACTTACAA ATCAGCTCGT TGCTGTTCCC GATGGCGTTA
CTGCTGCTGG TACTGTTGTA CTGTGCCCGC CGCTTCTCGC TGCATATTAA AAAGCAGATG
CTTAACATGG AGCCGCAGCA GCTTTCACAA CTATTAATTC AGCAAAGCGT GTTATTTGAG
TCGGTATTTG AAGGGTTGAT CGCCATTGAC TCCCATCACC GTATTACCGC CATTAACCAA
ACGGCTCGCC GCTTACTGAA TCTGAGCCAA CCGGAGTCTG AACTCATTGG CTATGCAATC
CACCATGTCG TGTTGCCGGA GGCCTTCTTT TACGATGCGC CGCAAAAAAA CAAAAAAGAT
GAGATCGTCA CCTTTAACCA AATGAAAGTC ATCGCCAGTC GCATGGCGGT CATTATTGAC
AACCAGCCTC AGGGCTGGGT TATTAGCTTT CGCAACAAAG ACGATATCAA TACACTCAGC
CTGCAGTTAA GTCAGGTGCG GCAATACGCC GATAACCTGC GCGCCGTGCA GCATGAGCAT
CGCAACCTTA TTTCCACCAT TGCCGGACTG CTGTTCCTGA AGCGCTACGA TAATGCGCTG
GCGCTGATTC AGCAGCAGTC GGAAAGCCAC CAGAAAGTAC TCGATTTTAT TTCCCATAAT
TTCCGCGACC ACCACCTTGC GGGGCTATTA ATCGGTAAAT ATTATCGGGC AAAAGAGCTG
GGGCTGGAGC TGATTTTCGA TCCTTCAAGC TTTGTTGAAC ACCTGCCGTC ATCGCTCTCG
CATAATGAAT GGATTTCGAT TGTTGGCAAT TTATTGGACA ACGCCTATAA CGCCACCCTG
CTCAATCGCG AAGGCTCGCG ACAGATTGAG TGCCTGATCA ACAGCGAAGG TAATGAAGTC
ATTATTGAAG TTGCCGATCA GGGATGTGGT ATTGACGAAA ATATCCGCCA GCATATTTTC
GAGCGTGGAG TGACCACCCA CAACAACGGC GATCACGGAA TTGGATTATG GTTGGTGCAC
AGCTACGTCA AGCAGGCCAA TGGTGACATT ATCGTCGATA ACAATAATCC TTTTGGCACC
ATTTTTACCC TCTATATCCC TTTTACCAGA GAAGAATAA
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| Protein sequence | MQENTVIKYL NTNMFIREIT RWFARHSFQN RIFLLILFTS TIVMLAITWY LTDITKERLH
YQVGQRALIQ AMQISAMPEL VEAVEAHDLS RIKALIDPMR SFSDATYITV GNEKGQRLYH
VNPDEIGKYM EGGDSDDALY NAKSYVSVRK GSLGSSLRGK SPIQDSTGKV IGIVSVGYTL
EQLESWLNLQ ISSLLFPMAL LLLVLLYCAR RFSLHIKKQM LNMEPQQLSQ LLIQQSVLFE
SVFEGLIAID SHHRITAINQ TARRLLNLSQ PESELIGYAI HHVVLPEAFF YDAPQKNKKD
EIVTFNQMKV IASRMAVIID NQPQGWVISF RNKDDINTLS LQLSQVRQYA DNLRAVQHEH
RNLISTIAGL LFLKRYDNAL ALIQQQSESH QKVLDFISHN FRDHHLAGLL IGKYYRAKEL
GLELIFDPSS FVEHLPSSLS HNEWISIVGN LLDNAYNATL LNREGSRQIE CLINSEGNEV
IIEVADQGCG IDENIRQHIF ERGVTTHNNG DHGIGLWLVH SYVKQANGDI IVDNNNPFGT
IFTLYIPFTR EE
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