Gene SNSL254_A0054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0054 
Symbol 
ID6484266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp58988 
End bp60139 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content48% 
IMG OID642735499 
Productputative nitrite reductase 
Protein accessionYP_002039281 
Protein GI194445334 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.550434 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCAA CAAGCGCCAC GGTGCTGGAG CTACCTGCCT GGGAGCGAAA CTATACCGGG 
ACTATCGCGG GGAAACCGGT AAACGTTAAT ATCACGCGAT TTGGTAACTC TCTTAATGGG 
TATTACTGCT ATGAACCTTG CAATCAGCAC AAGGCAGTGA TTGTTCTACG CGGCTCACTC 
CAGGATAAAG AGGTGCATCT TGAAGAACGC GTAAAGGCGC TTTCGGGTTA CTGGAATGCG 
GAAATCTCCA GCAGTGAGAT TAAAGGCGAA TGGACGTCCG CAGATAAAAA ACGACATTTT 
CCTGTTGCCC TTATCTATTA CAAACCTAAA AACTCCCCTG ATATTGTGCT GGTCACGAAC 
ACGAATGATG CAGGGGGTTA CGACCCTTCC AAAGAGATTG ATTGCGGCAA TACGCCGGCC 
ATTTCGGCGA TAAAATTATA CCGTGATGGT AAACTCATAC AGACCTTAGA TACCGCCTCG 
GTGGGCACTT GTAGCCCGTT TATGCCTCAA TGGGGGGATG TCAATTTTGA TGGCTACCCG 
GATCTATCGA TTGTAACAGA GTTACTTGCT GGGCCGGATG CTCCAGTACA AACATGGCTC 
TATGACCCCG CCAAACAGCG TTATGTTGAT GCGCCAGCGT CTTATCAGGA AATCACTTCA 
CCAGAGATCG ATGCTGAACA TAAACAGATT GTCAGCTATT GGCGCGGCGG TTGCTGCAGC 
CATGGCGTCA ATGTGTATCG CTGGAAAGGA AAAACGATTG AACTGATCGA GCGCGGTGAA 
AGCTACTTTC AGCCTGTGAT AAGTAAAGGC AAAATGTATA ACTGCTACAT GACACCTTCC 
TACGCTGATG GGCGTATTAT TTATCCGCTA GTACGTAAAA ATGGTCATTT GACGCCGCCT 
CTTAGCCTTG ATGGGACGTG TCAATCTTTT TGGCTAACCG GTAATGTTCG TACCGTGATC 
CAGGCAGAAA AACCCGGCGC TGAGCCCGAA TCGCTTGAGA TTCAGTGGCA GGAAAACAAA 
GCATCGCCAG GGCGTTTTTG CCCATTAGTT CCGTTTGTCG AAGGTGATAA GCTAAGTCCG 
CGTCTGGTGA CGGATGACGA TGTGCCTGAT GCCTGTATCA GTCGCGCTGA GTATGAAGAT 
ATAAAACAAT AG
 
Protein sequence
MDATSATVLE LPAWERNYTG TIAGKPVNVN ITRFGNSLNG YYCYEPCNQH KAVIVLRGSL 
QDKEVHLEER VKALSGYWNA EISSSEIKGE WTSADKKRHF PVALIYYKPK NSPDIVLVTN 
TNDAGGYDPS KEIDCGNTPA ISAIKLYRDG KLIQTLDTAS VGTCSPFMPQ WGDVNFDGYP 
DLSIVTELLA GPDAPVQTWL YDPAKQRYVD APASYQEITS PEIDAEHKQI VSYWRGGCCS 
HGVNVYRWKG KTIELIERGE SYFQPVISKG KMYNCYMTPS YADGRIIYPL VRKNGHLTPP 
LSLDGTCQSF WLTGNVRTVI QAEKPGAEPE SLEIQWQENK ASPGRFCPLV PFVEGDKLSP 
RLVTDDDVPD ACISRAEYED IKQ