Gene SNSL254_A0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0050 
SymbolileS 
ID6482941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp53810 
End bp56680 
Gene Length2871 bp 
Protein Length956 aa 
Translation table11 
GC content55% 
IMG OID642735494 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_002039276 
Protein GI194442276 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.632175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.280054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTATCA AACCGAAATA CGGAACCGAG AATCTGATGA GTGACTATAA ATCGACCCTG 
AATTTGCCGG AAACAGGGTT CCCGATGCGC GGCGACCTCG CCAAGCGTGA ACCGGGAATG
CTGGCGCGTT GGACCGATGA TGATCTGTAC GGCATCATTC GTGCGGCCAA AAAAGGCAAA
AAAACCTTCA TTCTGCATGA TGGCCCTCCA TATGCGAATG GCAGCATTCA TATTGGTCAC
TCAGTTAACA AGATTCTGAA AGACATTATC GTGAAGTCCA AAGGACTGTC GGGATTTGAC
TCGCCTTACG TGCCGGGCTG GGACTGTCAC GGTCTGCCTA TCGAGTTGAA AGTCGAGCAG
GAGTTCGGTA AGCCGGGCGA GAAATTCACT GCCGCTGAAT TCCGCGCCAA GTGCCGCGAA
TATGCCGCTA CGCAGGTTGA CGGCCAGCGT AAAGACTTCA TTCGTCTGGG CGTGTTGGGC
GACTGGTCGC ATCCGTACCT GACCATGGAC TTCAAAACCG AAGCCAACAT CATCCGCGCG
CTGGGCAGAA TTATCAAAAA CGGTCATCTG CACAAAGGCG CTAAGCCGGT GCACTGGTGC
GTTGACTGCC GTTCCGCGCT GGCGGAAGCG GAAGTTGAAT ATTACGACAA AACGTCACCG
TCTATCGACG TGGCGTTCCG CGCCGTCGAT CAGGATGCGG TGAAAGCGAA GTTCGGTCTG
CCGGGCGTGA GCGGCCCTGT GTCGCTGGTT ATCTGGACCA CTACGCCGTG GACACTACCG
GCTAACCGCG CCATCTCCCT GGCGCCGGAC TTTGATTATG CGCTGGTGCA GATTGACGGC
CAGGCGGTGA TTCTGGCGAA AGATCTGGTT GAAAGCGTCA TGCAGCGTAT TGGCGCGGCT
GAATACACCA TTCTCGGCAC CGTTAAAGGC GCGGAGCTGG AACTGCTGCG CTTTACCCAT
CCGTTTATGG GCTTTGACGT GCCGGCGATC CTCGGCGATC ACGTCACCCT GGACGCCGGT
ACCGGCGCGG TACATACCGC CCCTGGCCAC GGCCCGGATG ACTATGTGAT TGGTCAGAAA
TACGGTCTGG AAACCGCTAA CCCGGTTGGC CCGGACGGCA CTTACCTGCC AGGCACATAT
CCAACGCTTG ACGGTGTTAA CGTCTTCAAG GCGAACGATA TCGTTATTGA ACTGCTGAAA
GAAAAAGGCG CGCTACTGCA TGTCGAAAAA ATGCAGCACA GCTATCCGTG CTGTTGGCGT
CACAAAACGC CGATCATTTT CCGCGCGACC CCGCAGTGGT TCGTCAGCAT GGATAAAGAA
GGGCTTCGTC AACAGTCCCT GAAAGAGATC AAAGGCGTTC AGTGGATCCC GGACTGGGGT
CAGGCGCGTA TTGAATCAAT GGTCGCTAAC CGTCCTGACT GGTGTATCTC ACGTCAGCGT
ACCTGGGGCG TACCGATGTC GCTGTTCGTG CATAAAGAAA CGCAGGAGCT GCTGCCGATT
GAGCGTACTC TGGCGGCGAT GGAAGAGGTG GCGAAACGCG TCGAAGTTGA CGGTATCCAG
GCGTGGTGGG ATCTCGACCC GAAAGAGATC CTCGGCGAAG ATGCCGATCA ATACGAGAAA
GTTCCGGATA CGTTGGACGT TTGGTTTGAT TCCGGTTCCA CCAGTTACTC CGTGGTTGAT
GCACGTCCGG AATTCGCCGG TCATGCGGCC GATATGTATC TGGAAGGCTC TGACCAGCAT
CGCGGCTGGT TTATGTCCTC CCTGATGATT AGCGTGGCGA TGAAAGGCAA AGCGCCATAC
CGCCAGGTAC TGACTCACGG CTTCACCGTC GATGGTCAGG GGCGCAAGAT GTCCAAATCC
ATCGGTAACA CCGTGTCGCC GCAGGATGTG ATGAATAAAC TGGGCGCGGA TATCCTGCGT
CTGTGGGTGG CGTCTACTGA CTATACCGGC GAAATGGCGG TCTCTGACGA AATCCTGAAA
CGCGCTGCCG ACAGCTATCG TCGTATCCGT AATACCGCGC GCTTCCTGCT GGCGAACCTC
AATGGCTTCA ATCCGGCCAC CGATATGGTC AAACCGGAAG AGATGGTGGT GCTGGACAGG
TGGGCGGTGG GCTGCGCGAA AACGGCGCAG CAAGAGATTC TGAAGGCATA CGAAGCTTAC
GACTTCCATG AAGTGGTACA GCGCCTGATG CGCTTCTGCT CCGTTGAAAT GGGGTCGTTC
TACCTCGACA TCATTAAAGA CCGCCAGTAC ACCGCGAAGG CCGATAGCGT CGCGCGTCGT
AGCTGCCAGA CTGCGCTGTA TCATATCGCA GAGGCGCTGG TTCGCTGGAT GGCGCCGATC
ATGTCCTTCA CGGCTGATGA AATCTGGGGC TACCTGCCGG GCGAGCGTGA AAAATATGTC
TTCACCGGCG AATGGTACGA CGGGTTGTTT GGCCTGGAAG AGAATGAAGA ATTTAATGAC
GCATTCTGGG ACGATGTCCG CTATATCAAG GACCAGGTCA ACAAAGAGCT GGAAAATCAG
AAAGCCAATG GCATCAAATC GAACCTGGAA GCAAAAGTGA CGCTGAAATA TGCTGACGAT
GCTAACGGTA CGATCAAGAA GCTGAAACTG TTGGGTGAAG AGGTCAGATT TATCTTCATT
ACTTCCCAGT TCGTGATTTC TGAGCAAGCG GGGGGTATTG ATGATGAAAA TATTCAGTAC
AATGCTGGTA ATACGACAGT TCAGGCAGTG GTAACGCGTG CCGAGGGTGA TAAGTGTCCG
CGCTGCTGGC ACTACACTAC TGATGTCGGC AAGGTGGCGG AACATGCAGA TATCTGCGGA
CGCTGTGTCA GCAACATCGC CGGTAATGGC GAACAACGTA AATTTGCCTG A
 
Protein sequence
MFIKPKYGTE NLMSDYKSTL NLPETGFPMR GDLAKREPGM LARWTDDDLY GIIRAAKKGK 
KTFILHDGPP YANGSIHIGH SVNKILKDII VKSKGLSGFD SPYVPGWDCH GLPIELKVEQ
EFGKPGEKFT AAEFRAKCRE YAATQVDGQR KDFIRLGVLG DWSHPYLTMD FKTEANIIRA
LGRIIKNGHL HKGAKPVHWC VDCRSALAEA EVEYYDKTSP SIDVAFRAVD QDAVKAKFGL
PGVSGPVSLV IWTTTPWTLP ANRAISLAPD FDYALVQIDG QAVILAKDLV ESVMQRIGAA
EYTILGTVKG AELELLRFTH PFMGFDVPAI LGDHVTLDAG TGAVHTAPGH GPDDYVIGQK
YGLETANPVG PDGTYLPGTY PTLDGVNVFK ANDIVIELLK EKGALLHVEK MQHSYPCCWR
HKTPIIFRAT PQWFVSMDKE GLRQQSLKEI KGVQWIPDWG QARIESMVAN RPDWCISRQR
TWGVPMSLFV HKETQELLPI ERTLAAMEEV AKRVEVDGIQ AWWDLDPKEI LGEDADQYEK
VPDTLDVWFD SGSTSYSVVD ARPEFAGHAA DMYLEGSDQH RGWFMSSLMI SVAMKGKAPY
RQVLTHGFTV DGQGRKMSKS IGNTVSPQDV MNKLGADILR LWVASTDYTG EMAVSDEILK
RAADSYRRIR NTARFLLANL NGFNPATDMV KPEEMVVLDR WAVGCAKTAQ QEILKAYEAY
DFHEVVQRLM RFCSVEMGSF YLDIIKDRQY TAKADSVARR SCQTALYHIA EALVRWMAPI
MSFTADEIWG YLPGEREKYV FTGEWYDGLF GLEENEEFND AFWDDVRYIK DQVNKELENQ
KANGIKSNLE AKVTLKYADD ANGTIKKLKL LGEEVRFIFI TSQFVISEQA GGIDDENIQY
NAGNTTVQAV VTRAEGDKCP RCWHYTTDVG KVAEHADICG RCVSNIAGNG EQRKFA