| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0039 |
|---|
| Symbol | |
|---|
| ID | 6485400 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 40122 |
|---|
| End bp | 41615 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642735483 |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_002039265 |
|---|
| Protein GI | 194443287 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3119] Arylsulfatase A and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 57 |
|---|
| Fosmid unclonability p-value | 0.225946 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGAA CAGTCGTTGC CAGTATGATA GGGTTGGCGC TATGCGCTGG ATGCGTATTA
TCAACCGCGC AAGCGGCAAC CGCAAAGCGT CCTAACTTAG TCATTATTCT GGCGGATGAT
TTAGGGTATG GCGATCTCGC CACCTACGGG CACCGCATCG TTAAAACACC TAACATAGAC
AAATTGGCGC AGGAGGGGGT GAAGTTTACC GACTATTATG CGCCAGCGCC TCTGTGTTCT
CCTTCCCGCG CGGGCCTGTT AACCGGTCGT ATGCCGTTCC GTACCGGAAT CCGTTCCTGG
ATACCGGAAG GCAAAGATGT TGCGCTGGGG CGTAATGAAC TGACTATCGC CAATCTGCTA
AAACAGCAGG GCTACGATAC GGCGATGATG GGGAAATTAC ACCTGAATGC GGGCGGCGAT
CGCACCGATC AGCCGCAGGC GAAAGACATG GGCTTTGACT ATACGTTGGT TAATCCGGCG
GGATTTGTCA CCGATGCTAC GCTGGATAAC GCCAAGGAGC GCCCGCGCTA TGGCGTGGTG
CATCCTACGG GGTGGATTCG TAATGGCCAA CATATTGGCC GCGCAGATAA GATGAGCGGC
GAGTTTGTGA GCTCTGAAGT GGTGAACTGG CTGGATAATA AAAAAGACGA TAATCCGTTC
TTCTTATATG TCGCCTTTAC CGAAGTCCAT AGCCCGCTGG CGTCGCCGAA AAAATACCTT
GATATGTATT CGCAGTACAT GACCGACTAC CAGAAGCAGC ATCCGGATCT GTTCTACGGT
GACTGGGCAG ACAAACCGTG GCGCGGTACC GGCGAATATT ACGCCAATAT CAGCTATATG
GATGAGCAGG TCGGTAAAGT GCTGGATAAA ATTAAGGCGA TGGGCGAGGA AGATAACACT
ATCGTCATCT TTACCAGCGA CAACGGCCCT GTCACGCGTG AAGCGCGTAA GGTATACGAG
CTGAACCTGG CCGGGGAAAC CGACGGTCTG CGCGGGCGTA AAGACAACCT GTGGGAAGGT
GGCATTCGCG TACCGGCAAT CATCAAATAC GGCAAGCACA TTCCACAGGG GATGGTAACG
GACACGCCGG TATATGGTCT TGACTGGTTG CCGACGCTGG CCAACATGAT GGACTTTAAA
CTTCCGACCG ATCGTACCTA CGACGGTCAG TCTTTAGTTC CGCTCCTGAA GGACAAGACG
TTAAAACGCC AGAAACCGCT GATCTTCGGT ATCGATATGC CGTTCCAGGA CGATCCAACG
GATGAGTGGG CGATCCGCGA CGGCGACTGG AAGATGATCA TCGATCGCCA GAATAAACCT
AAATATCTCT ATAACCTGAA AACCGATCGT TTCGAGACGC TCAATCAAAT TGGTAAACAG
CCGCAGATTG AGAAACAGCT TTACGGTAAG TTCCTGAAGT ATAAAAAGGA TATTGATAAC
GATTCGCTGA TGAAAGCCCG TGGCGATAAG CCGACGCCTG TCACTTGGGG CTAA
|
|---|
| Protein sequence | MKRTVVASMI GLALCAGCVL STAQAATAKR PNLVIILADD LGYGDLATYG HRIVKTPNID
KLAQEGVKFT DYYAPAPLCS PSRAGLLTGR MPFRTGIRSW IPEGKDVALG RNELTIANLL
KQQGYDTAMM GKLHLNAGGD RTDQPQAKDM GFDYTLVNPA GFVTDATLDN AKERPRYGVV
HPTGWIRNGQ HIGRADKMSG EFVSSEVVNW LDNKKDDNPF FLYVAFTEVH SPLASPKKYL
DMYSQYMTDY QKQHPDLFYG DWADKPWRGT GEYYANISYM DEQVGKVLDK IKAMGEEDNT
IVIFTSDNGP VTREARKVYE LNLAGETDGL RGRKDNLWEG GIRVPAIIKY GKHIPQGMVT
DTPVYGLDWL PTLANMMDFK LPTDRTYDGQ SLVPLLKDKT LKRQKPLIFG IDMPFQDDPT
DEWAIRDGDW KMIIDRQNKP KYLYNLKTDR FETLNQIGKQ PQIEKQLYGK FLKYKKDIDN
DSLMKARGDK PTPVTWG
|
|---|
| |