Gene SNSL254_A0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0030 
Symbol 
ID6484079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp31267 
End bp32112 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content55% 
IMG OID642735475 
Producthypothetical protein 
Protein accessionYP_002039257 
Protein GI194444351 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.619375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.116202 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTATC ACGCGTTAAA ACTTTCCCGA CTGGCGATGT TGGCGTTGGC AGGCGTTGCC 
GTATCCGCCT CGGCAATCGC CGCCGATTCT GCCCCGACGT CGCAAATTGG TCCGACGGCG
GAAGCCTACA TCGTCAGTCA TCCGGATAAA GTGGGAGAGG TCGTGGCAAC GTATTTGGCC
GAACATCCGG AATTTTTGGT CGCCGCCAGC GAGACGTTGC ATCAGCGTCA GCAGATTGCG
CAACAGCAGG CGTATGTTCA ACTGGCATTA CAGTATCGTG CTGAGTTGCT CAGTAGCAGC
AGTCCTTCCG TTGGGCCCAG CGAGGCAAAA GCGGCGGTGG TGATGTTCTT TGATTACCAG
TGCTCGTGGT GCAGCAAAAT GGCGCCTGTG GTCGAAAACC TGATTAAGGC GAACCCGGAT
ACCCGGTTTA TTTTCAAAGA GTTTCCTATT TTTTCCTCCC GCTGGCCGGT ATCCGGACTG
GCGGCCAGAG TCGGCGAACA GGTATGGCTT ACACAGGGCG GGGCGAAATA TCTCGACTGG
CATAATGCGC TTTATGCCAC AGGGAAGGTG GAAGGCGCGT TAACGGAACA CGATGTCTAC
ACCCTGGCGC AACATTATCT AACGTCGACG CAGCTGGCCG CCGTAAAAGA AGCGCAAAGC
AGCGGTGCAG TACATGATGC GCTCCTCACT AACCAGGCAC TGGCGCAGCA TATGGACTTT
AGCGGCACGC CTGCTTTTGT CGTCATGCCT CAGACGCAAA ACGGTGATGT AAAACGGGTG
ACCGTGATCC CGGGAAGCAC GACTCAGGAT ATGTTGCAAA TGGCGATTCA GAAAGCGAAG
GGGTGA
 
Protein sequence
MYYHALKLSR LAMLALAGVA VSASAIAADS APTSQIGPTA EAYIVSHPDK VGEVVATYLA 
EHPEFLVAAS ETLHQRQQIA QQQAYVQLAL QYRAELLSSS SPSVGPSEAK AAVVMFFDYQ
CSWCSKMAPV VENLIKANPD TRFIFKEFPI FSSRWPVSGL AARVGEQVWL TQGGAKYLDW
HNALYATGKV EGALTEHDVY TLAQHYLTST QLAAVKEAQS SGAVHDALLT NQALAQHMDF
SGTPAFVVMP QTQNGDVKRV TVIPGSTTQD MLQMAIQKAK G