Gene SNSL254_A0021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A0021 
Symbol 
ID6483405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp20052 
End bp23048 
Gene Length2997 bp 
Protein Length998 aa 
Translation table11 
GC content55% 
IMG OID642735466 
Productputative hydroxymethyltransferase 
Protein accessionYP_002039248 
Protein GI194445060 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value0.468352 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTT CCATTTACGC CAGCGCATTT GACGTCAACA GCTGGTATCA AAAAATCACC 
TTAACTTTCA TCAATGAGAG CGGTAATGCG GTCGATATGA ACCATGCCGC AATATCATTC
ACGGCTTCCG GGCACATCGA TCCATGGGGA AATAGCGGCG GTACGCTCAA AGGGAACCTG
CCGCTTACGC TGAATGAGAG TTCGTATGGC ACGCTGGAAA CTAACAACAT CATCATTAAT
AACAGCGATG CATTACTTCT TCAGCCGGGC GAACGCGGGA CGCTCTCTTT CAGCCTCGCG
GCGACGCAGG TGCCGGTAAA AATGTCCGCC ATCACCTTGA CGCTGGCGTC ATCGTCATCC
GAAGACGCAG AGTCTGAAAC CCCATCCGAT CAGGAGACGC CAGCGATACC CGCCGCAGAC
GAACAACCCG CCGAACCCGA TGTGCCGGAA AAGGACAATG ACCTTCAGGA ACGCGGCCTT
ACGCTTAACG TTAGCGAGTT GAATACCGCG AGTTGGTATC AACGCGTCAC CTTTACGCTG
ACCAACCTCT ACGCCCAGGC GGTAGATCTC AATCAGCTTC AACTGAATTT TACGGCCAGC
GCGCACCCCG ATCCCTACAG TCCGTTTCAG GGAACAATGC TGGGGAATCA GGCCGTGACG
CTGGCCAGCG ATGGGGGATG GCCCATCGAG AAGAATACCA TCACCATTAA TCATGACGGC
GCGCTGATGC TGGCGGCAGG GGATATCGCC GAATTACAGT GCTATCTGGC CGCCACGCAG
ACGCCAGTTG CCATCAGCGA TTTGAACGCG ACGTTGGCCC ATGACCCTGC CCGCCAGGGA
AAAATTTGCG TTCATTTTCC TGCCATGACG CAGACCGTGG CGCTCAAACC GGTGATTGAG
CTGCTGTTTC CTGCCGGCGA AACCCGGCGC TTTGTCGGTG AGTGGGGCGA GGTTCTGACA
ATAGGCGATC TTAGCGCAGG AACGTATCGG CTTACCGTAC CGGTACTGGC GAATGATGAG
ATGCAAATCG CGCCAGTCGA GTCCTCTTTT ACCGTTACGC TGCAATCCGG CGATGCCGCC
GCGCAGGTCC AGGTATCCTG TCTGCCGATT GTCCGTTATG CCAGCGCGCG TCTGATGATT
GACGCCCCTG CGCTTGGTAA TGCGAAATTG ACCGTTGAAA TCGCTGATAC TACGCAAGCG
GATGAGCGTA CTATCACGCT TATCGCCAAC CAACCGCAGT TAATCACCCG GCTACTGGCG
GGGCATCATT ATACGGTCAA TCTGCAGCCT GCGATGATTA ATAACCGCTT TATATCGGCA
CCCATACAGC TTACGGGGTT TATCCCTGCT GCGGCGCAGA TTGCCGAGGT TGCTGTCGCT
TACCAACAGT CGGCGCTCGA CACGGCGAGT TTCGTGACGG TGGATGCCAC TATACTGGGC
CTGCCCGATG GCGTCGCGCC GCAGCGTTAT CTGTTCAGCA GCGGTAAATA TCAGTACTCA
TTAATGCTGG AGAGCGGCAG CGATCGGCAG ACGTTGGCAT TACGCTTTGC ACCCGGGCTG
TATGATGTTC AGACGGACGA CATTTTCATC GACAGCGTGC CGTGGCGTTG TGAACAGGCC
GGGCCGCTAC GGTTGTTGCA AAAGGTTAAC CATGTGGCGC TGGAGTTTCT GCCCGGCGTG
ACGCTACAGG TAAAAGGTTG GCCTGATTAC CTTGCTCATG GCGGCGTGAC GGTTAACGCG
CCAGAGACGG TTTCTCTTTA TCGCGATATA CCGTTTAGCG CGTTGTTTAA ATACGATGGT
TTTGACGGCG GCGGCGATCC GGTTCCGGCC GCGGAGGTTG ACGTGAACGG GGATGGTTTT
CTGGATTACG CGACGTTACC GATCCATAAA ACCGTTGCGC TGGTGCGCCA GATAGAAAAA
GAAGCCGGGC GTAGCGTCAT GCCGGTAATG GTCATTTATA CCGCGAATGC CAGCGGCGGT
AGCGCGCTGG CGGATTTACA GGATGCGCAA AAGCTACGTA ACCATTTTGG TAACTTTATT
ACCCAGTGTC TGGCGGCGCA GTCATACAAA GATGAGACGC ATCCTGTCCC GGCCACCTTT
GTGCTTAACC CGGATTTTCT CGGGGCACTA CAGCAAGGAC CGTATGGCTA TACCGTAGTA
CGGCAAAAAA ACAGTGTGCC GGTGAATGCC CAACTGGCGG CGGCGATACA AGCATTACCG
GCGATGGCTG GCTTTATCGC GCCTTCGTTG CCGACGTTTA GCGACGATCT CTACGGCTAT
ATTCAGGCGG TGAACTATCT CGTTCGTCAG TTTGCCCCGG ATGTGGCTTT TGGCTGGCAG
ACGAATGTCT GGGCGACAGG AACGGCGGAC TGGGTGCTGC GCGATACCGC TGATCCGGTA
GCTGAAGGGC AGGCGATCGC CGGATTTATT CATGAACTGG GCGTTTATAG TGGAGAATAT
GCGCCGGACT TTATTGCGTT TGATAAATTT GAGCGTGACT GTTTCAGTCC TGATGCGCTT
GCCCACTATG GCTGGAATGC GACATGCTGG CTTAATTACC TGGCGATGGT CAAACAGGTG
ACGAAAGCGC TGCTGACGCC CGCCATGCTG TGGCAAATCC CAGGCGGCCA TATGCCTTCA
GTAGAAGAGG GCGTCAGTAA AATCAGCGCT GCGCACTTTG CATCCGGCGG AACCTTTTTT
ATGGGTGACG CCCGCATTGG CAGCGATCCT GACACGCTCT CTTTGCAGCT ACTCAATACG
GCCTTAAATA GCGCGACTTA CGGCGTCCCG ACCGTCGGCG ACTTTTTACG TAAAGATAAA
GGGTATGACT GGGGCCAAAT GCAGGCGCTG AACCTACCGG ACTTTAACGT CTTTTCGATC
TTATGGGGCG GTGGTTCTAC TATCAGTATT ACGACAATCC ATTCTAACGG TGAAGACGGC
GGCTGGCTGG CGGATAAAAT GGTAGAGTAT TATGCTGCCC CTCGCTATTT CAGATAA
 
Protein sequence
MTISIYASAF DVNSWYQKIT LTFINESGNA VDMNHAAISF TASGHIDPWG NSGGTLKGNL 
PLTLNESSYG TLETNNIIIN NSDALLLQPG ERGTLSFSLA ATQVPVKMSA ITLTLASSSS
EDAESETPSD QETPAIPAAD EQPAEPDVPE KDNDLQERGL TLNVSELNTA SWYQRVTFTL
TNLYAQAVDL NQLQLNFTAS AHPDPYSPFQ GTMLGNQAVT LASDGGWPIE KNTITINHDG
ALMLAAGDIA ELQCYLAATQ TPVAISDLNA TLAHDPARQG KICVHFPAMT QTVALKPVIE
LLFPAGETRR FVGEWGEVLT IGDLSAGTYR LTVPVLANDE MQIAPVESSF TVTLQSGDAA
AQVQVSCLPI VRYASARLMI DAPALGNAKL TVEIADTTQA DERTITLIAN QPQLITRLLA
GHHYTVNLQP AMINNRFISA PIQLTGFIPA AAQIAEVAVA YQQSALDTAS FVTVDATILG
LPDGVAPQRY LFSSGKYQYS LMLESGSDRQ TLALRFAPGL YDVQTDDIFI DSVPWRCEQA
GPLRLLQKVN HVALEFLPGV TLQVKGWPDY LAHGGVTVNA PETVSLYRDI PFSALFKYDG
FDGGGDPVPA AEVDVNGDGF LDYATLPIHK TVALVRQIEK EAGRSVMPVM VIYTANASGG
SALADLQDAQ KLRNHFGNFI TQCLAAQSYK DETHPVPATF VLNPDFLGAL QQGPYGYTVV
RQKNSVPVNA QLAAAIQALP AMAGFIAPSL PTFSDDLYGY IQAVNYLVRQ FAPDVAFGWQ
TNVWATGTAD WVLRDTADPV AEGQAIAGFI HELGVYSGEY APDFIAFDKF ERDCFSPDAL
AHYGWNATCW LNYLAMVKQV TKALLTPAML WQIPGGHMPS VEEGVSKISA AHFASGGTFF
MGDARIGSDP DTLSLQLLNT ALNSATYGVP TVGDFLRKDK GYDWGQMQAL NLPDFNVFSI
LWGGGSTISI TTIHSNGEDG GWLADKMVEY YAAPRYFR