Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0013 |
Symbol | dnaK |
ID | 6485655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 11594 |
End bp | 13510 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642735458 |
Product | molecular chaperone DnaK |
Protein accession | YP_002039240 |
Protein GI | 194444220 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0443] Molecular chaperone |
TIGRFAM ID | [TIGR02350] chaperone protein DnaK |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTAAAA TTATTGGTAT CGACCTGGGT ACTACCAACT CTTGTGTAGC GATTATGGAT GGAACGCAGG CACGCGTGCT GGAGAACGCC GAGGGCGATC GCACTACGCC TTCTATCATT GCTTATACCC AGGATGGTGA AACTCTGGTT GGTCAGCCGG CTAAACGTCA GGCAGTGACA AACCCGCAAA ACACCCTGTT TGCGATTAAA CGCCTGATTG GCCGCCGCTT CCAGGACGAA GAAGTTCAAC GTGACGTTTC TATCATGCCG TACAAAATCA TCGGCGCCGA CAACGGCGAC GCATGGCTTG ATGTGAAAGG TCAGAAAATG GCGCCGCCGC AGATTTCTGC CGAAGTGCTG AAGAAAATGA AGAAAACGGC TGAAGATTAT CTGGGCGAAC CGGTAACTGA AGCGGTTATC ACCGTACCGG CTTACTTTAA CGATGCGCAG CGTCAGGCAA CCAAAGATGC TGGTCGTATC GCGGGGCTGG AAGTTAAACG TATCATCAAC GAACCGACTG CCGCAGCGCT GGCTTACGGT CTGGATAAAG AAGTCGGCAA CCGTACTATC GCGGTTTACG ACCTCGGTGG TGGTACTTTC GATATCTCTA TTATCGAAAT CGACGAAGTT GATGGCGAAA AAACCTTTGA AGTTCTGGCA ACCAACGGTG ATACCCACCT GGGTGGTGAA GACTTCGATA CCCGCCTGAT CAACTACCTC GTTGACGAGT TTAAGAAAGA TCAGGGCATT GACCTGCGTA ACGATCCGCT GGCCATGCAG CGCCTGAAAG AAGCCGCAGA AAAAGCCAAA ATCGAGCTGT CTTCTGCGCA GCAGACCGAC GTGAACCTGC CGTACATTAC CGCAGATGCC ACCGGTCCGA AACACATGAA CATCAAAGTG ACTCGTGCGA AACTGGAAAG CCTGGTTGAA GATCTGGTGA ACCGTTCTAT CGAGCCGCTG AAAGTCGCAC TGCAGGACGC TGGCCTGTCC GTGTCTGATA TCAACGACGT GATCCTCGTC GGCGGTCAGA CCCGTATGCC AATGGTGCAG AAAAAAGTGG CTGAATTCTT TGGTAAAGAG CCGCGTAAAG ACGTTAACCC GGACGAAGCT GTGGCTATCG GCGCAGCGGT ACAGGGCGGC GTGTTGACCG GTGATGTGAA AGACGTACTG CTGCTGGACG TTACCCCGCT GTCTCTGGGT ATCGAAACGA TGGGTGGCGT GATGACTCCG CTTATCACCA AAAACACCAC CATCCCGACC AAGCACAGCC AGGTGTTCTC TACTGCGGAA GACAACCAGT CTGCGGTAAC CATCCATGTG CTGCAGGGTG AGCGTAAACG TGCGTCTGAT AACAAATCTC TGGGTCAGTT CAACCTGGAT GGCATCAACC CGGCGCCGCG CGGTATGCCG CAGATCGAAG TCACCTTCGA TATCGATGCT GACGGTATCC TGCACGTCTC CGCGAAAGAT AAAAATAGCG GTAAAGAGCA GAAGATCACT ATCAAGGCGT CTTCTGGTCT GAACGAGGAA GAAATTCAGA AAATGGTTCG CGATGCAGAA GCGAACGCTG AATCCGACCG TAAGTTCGAA GAGCTGGTTC AGACCCGTAA CCAGGGCGAC CATCTGCTGC ACAGCACCCG TAAGCAGGTT GAAGAAGCAG GCGATAAACT GCCGGCTGAT GACAAAACCG CTATCGAGTC TGCCCTGAAC GCGCTGGAAA CTGCCCTGAA AGGCGAAGAT AAAGCCGCTA TCGAAGCGAA AATGCAGGAA CTGGCGCAGG TTTCCCAGAA ACTGATGGAA ATCGCTCAGC AGCAACATGC GCAGCAGCAG GCTGGCTCCG CTGACGCTTC TGCAAACAAC GCGAAAGATG ACGACGTTGT CGACGCTGAG TTTGAAGAAG TAAAAGATAA AAAATAA
|
Protein sequence | MGKIIGIDLG TTNSCVAIMD GTQARVLENA EGDRTTPSII AYTQDGETLV GQPAKRQAVT NPQNTLFAIK RLIGRRFQDE EVQRDVSIMP YKIIGADNGD AWLDVKGQKM APPQISAEVL KKMKKTAEDY LGEPVTEAVI TVPAYFNDAQ RQATKDAGRI AGLEVKRIIN EPTAAALAYG LDKEVGNRTI AVYDLGGGTF DISIIEIDEV DGEKTFEVLA TNGDTHLGGE DFDTRLINYL VDEFKKDQGI DLRNDPLAMQ RLKEAAEKAK IELSSAQQTD VNLPYITADA TGPKHMNIKV TRAKLESLVE DLVNRSIEPL KVALQDAGLS VSDINDVILV GGQTRMPMVQ KKVAEFFGKE PRKDVNPDEA VAIGAAVQGG VLTGDVKDVL LLDVTPLSLG IETMGGVMTP LITKNTTIPT KHSQVFSTAE DNQSAVTIHV LQGERKRASD NKSLGQFNLD GINPAPRGMP QIEVTFDIDA DGILHVSAKD KNSGKEQKIT IKASSGLNEE EIQKMVRDAE ANAESDRKFE ELVQTRNQGD HLLHSTRKQV EEAGDKLPAD DKTAIESALN ALETALKGED KAAIEAKMQE LAQVSQKLME IAQQQHAQQQ AGSADASANN AKDDDVVDAE FEEVKDKK
|
| |