| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0006 |
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| Symbol | |
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| ID | 6483544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 5966 |
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| End bp | 7396 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642735451 |
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| Product | amino-acid carrier protein AlsT |
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| Protein accession | YP_002039233 |
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| Protein GI | 194442782 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.557087 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 77 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAGT TTTTCAGTTT TATTAACGAA ATACTCTGGG GCTCGGTAAT GATTTACCTG
CTGCTCGGCG CAGGATGTTG GTTTACCTGG CGTACCGGAT TCATTCAATT TCGTTATATT
CGCCAATTTA GCCGCAGTCT GAAAGGCAGC CTTAGCCCGC AGCCAGGCGG CCTGACGTCA
TTTCAGGCGC TGTGTACCAG CCTCGCGGCG CGGATTGGCA GCGGTAATCT GGCCGGCGTG
GCGCTGGCTA TCGCCGCAGG CGGTCCCGGC GCGGTATTCT GGATGTGGGT CTCGGCCATC
ATTGGCATGG CGACCTCCTT CGCCGAGTGT TCGCTTGCCC AGCTTTATAA AGAACGTGAC
CCGACAGGCC AGTTCCGCGG CGGCCCGGCG TGGTATATGG CGCGTGGGCT GGGAATGCGC
TGGATGGGCG TGGTTTTCGC CCTCTTTCTG CTCGTCGCCT ACGGGTTGAT TTTTAATAGC
GTGCAGGCGA ATGCCGTCTC ACGCGCGCTC CATTTCGCCT TCAACATTCC GCCGCTTATC
TCCGGCATTG CTCTGGCGTT CTGTGCCCTG TTAATTATCA TTCGCGGCAT AAAAGGCGTC
GCCCGCCTGA TGCAATGGCT GATTCCCCTC ATCGCGTTAT TGTGGGTCGC CGGCAGCGTG
TTCATTTGCC TCTGGCATAT TGAGCAAATG CCTGGCGTTA TCGCCTCGAT AGTCAAAAGC
GCATTTGGCT GGCAGGAAGC CGCGGCAGGC GCAGCCGGAT ATACGCTCAC TCAGGCTATT
ACCAGCGGTT TTCAGCGTGG GATGTTCTCT AATGAAGCGG GAATGGGGTC AACGCCTAAT
GCGGCCGCAG CGGCAACGTC GTATCCCCCT CACCCTGTCG CGCAGGGGAT TGTGCAAATG
ATTGGCGTAT TCAGCGACAC CATTATCATC TGTACCGCCA GCGCGATGAT TATCCTGCTG
GCGGGGAATC ACGCGTCCCA CTCGTCAACA GAAGGCATTC AGCTTCTCCA ACATGCAATG
GTTTCGTTGA CCGGTGAATG GGGCGCCAGT TTTGTCGCGC TTATCGTCAT TCTGTTCGCG
TTCAGTTCTA TCGTCGCCAA CTATATTTAC GCCGAAAACA ATCTGTTTTT TCTGCGGTTA
CATAACGCAA AGGCCATCTG GCTATTACGC CTTGCGACGC TTGGCATGGT TATCGCCGGT
ACGCTTATCA GTTTTCCGCT GATATGGCAG CTCGCTGACA TGATCATGGC CTGTATGGCC
ATTACCAATC TGACAGCGAT TTTGTTGCTC TCACCGGTGG TGTATACCCT CGCCGGCGAT
TATCTGCGAC AACGGAAACT GGGCGTAAGA CCGCAGTTTG ATCCGCGGCG CTTCCCGGAT
ATCGAACCAC AACTGGCGCC AGATACCTGG GAGGCGGCAT CGCGCGATTA A
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| Protein sequence | MPEFFSFINE ILWGSVMIYL LLGAGCWFTW RTGFIQFRYI RQFSRSLKGS LSPQPGGLTS
FQALCTSLAA RIGSGNLAGV ALAIAAGGPG AVFWMWVSAI IGMATSFAEC SLAQLYKERD
PTGQFRGGPA WYMARGLGMR WMGVVFALFL LVAYGLIFNS VQANAVSRAL HFAFNIPPLI
SGIALAFCAL LIIIRGIKGV ARLMQWLIPL IALLWVAGSV FICLWHIEQM PGVIASIVKS
AFGWQEAAAG AAGYTLTQAI TSGFQRGMFS NEAGMGSTPN AAAAATSYPP HPVAQGIVQM
IGVFSDTIII CTASAMIILL AGNHASHSST EGIQLLQHAM VSLTGEWGAS FVALIVILFA
FSSIVANYIY AENNLFFLRL HNAKAIWLLR LATLGMVIAG TLISFPLIWQ LADMIMACMA
ITNLTAILLL SPVVYTLAGD YLRQRKLGVR PQFDPRRFPD IEPQLAPDTW EAASRD
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