| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3978 |
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| Symbol | |
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| ID | 6474862 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 4476351 |
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| End bp | 4479809 |
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| Gene Length | 3459 bp |
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| Protein Length | 1152 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642733181 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_002030360 |
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| Protein GI | 194367750 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.508831 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.169335 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTCTCCA GCTGGATCCT GCTGCTGGTC TCGGTTGCCT ATGCCGCGCT GCTGTTCGGC
GTGGCGTGGT GGGGTGACCG TCGGCCGATG TACCCCGACC GGCCGTGGCT GCGGCCGGTG
GTCTACAGCC TGGCACTGGC CGTGTACTGC TCGTCGTGGA CGTTCTACGG TGCGGTCGGT
ACCGCCGTGC GCAACGGCGT GGGCTACCTG CCGATCTATA TCGGTCCGTT GCTGCTGCTG
TTGTTCGGCT GGCGCATCAT CGAGCGCCTG GCGCTGATCG CACGCAGCCA GAACGTGGTG
TCCATCGCCG ACTTCATTTC TTCGCGCTTC GGTCGCTCGC GGCGGCTGGC GGCGCTGGTG
GCGATCATCG CGCTGATCGG CATCATTCCG TACCTGGCCC TGCAGTACAA AGCGGTGGCA
ATGAGCCTGC AGGTGCTGAC CGGCAACACC GGCCCGACCG GCTTCTTCAG CGATCCGGCG
CTGTACGTGG CGCTGCTGAT GGCGCTGTTC GCCACCCTGT TCGGCACCCG CCAGGTCGAC
GCTACCGAGC ACCACCACGG CATGATGCTG GCCATCGCGC TGGAGTCGGT GATCAAGCTG
GTAGCGATGG TGGCCGTGGG CGTGTTCGCC TACGTCTGGC TCAGCGACCG CAACGAGGCG
GTGGTGGAGT CGGTGCATAC ACTGTTCACC GGGCTGCCGC CGGTGGGCTT CATCTCGCAG
ACCCTGCTCA GTTTCCTCGC CATCATCTGC CTGCCGCGCC AGTTCCACGT GGCCGTGGTC
GAGTGCGGTG ACGTACGCGA TGTGCGCCGC GCGCGCTGGA TGTTCGGTGG CTACCTGGTG
CTGATCTCGG CGATGGTGCT GCCGATCGCT ACCGCGGGTG TCAGCCTGTT CGGCACCGGC
AGCAGCGTCG CCGATGATTC GATGGTGCTG GCGTTGCCGC TGGCCGAGGG GCGCAACGCC
CTGGCGCTGA TCGCCTACGT AGGCGGATTC TCCGCCGCTA CCGGCATGGT CATCGTGTCC
TCGATCGCGC TGGCCACCAT GGTCAGCAAC GACCTGGTGA TGCCGGTGCT GCTGCGCCGC
AGTGGTGATC ACCAGGAAGC GGCCGACGTC GCTTCACGGG TGTTGTGGAT CCGCCGTCTG
GCGATCCTGC TGCTGGCGTT GATGGCTTAC AGCTACTACC GCAGCAGCAG CAACGACAGC
ACGCTGGCCT CGTACGGCCT GATGGCCTTC GCCGCGGTGG CCCAGTTCGC GCCCGGCCTG
ATCGGTGGCC TGTACTGGCG CGGTGCCAGC CGTCGCGGTG TCGAGACCGG CATGCTGCTG
GGCTTCGCCA CCTGGCTCTA CACCCTGCTG CTGCCTGCGA TGACCATCGC CGGCTGGATG
GACGACGGCT GGGTACAGAA CGGCCCGTTT GGCATCGCCT GGCTGCGCCC GCAGCAGTTG
TTCGGCATGA CCGGCTGGGA TCCGCTGACC CATGGCACGT TCTGGTCGCT GCTGGTCAAT
GCGGCGACGA TGATGCTGGT GTCCGCGCGC TGGCGTCCCG GTGTGGACGA GCGTCTGCGC
GCCGCGCCGT TCCTCGACCC GTATGCCGAG CGCCCGTCGG TGGCCGGTGG CTGGCCTGGT
CACGTGCATG TGGGTGACCT GCTGGCGCTG GCCTCCCGCG TGGTCGGCGA GCGCCATGCG
CGGCGTTCGT TCTTCGAGCA GGCGCAGTCG CTGGGCCGCG AACTGCAATC CTCGGCGCCT
GCGGACCGGC CGTGGGTACA GTTCACCGAG CGTCTGCTGG CTGCGTCGAT CGGTGCGGCA
TCGGCACGCC TTCTGCTGAC CAGCCTGCTG CGCGGTTCGG GCATGGACCT GGGTGAAGTG
GTGGCGGTGC TGGATGAGGC CGGCCAGGAG CTGCGCTTCA ACCGCGAGAT CCTCTCGACC
ACGCTGGAGA ACATCAGCGC CGGGGTCAGC GTGGTCGACC CGGACATGCG GCTGACCGCG
TGGAATCGCC GCTACCAGGA CATGTTCGGC TACCCCGACG GCATGCTCTA CGTCGGGCGG
CCGGTGGCTG ACCTGATCCG CTACAACGCC GAGCGGGGTG AGCTGGGCGA GGGCGATATC
GAAATCCAGA TCAACCGCCG CATCGGCTAC ATGCGGGCCG GTTCGCCGCA CGTGTTCGAG
CGCACCCGCA GCGATGGCAA GGTGATCGAG ATGCGCGGCC AGGCATTGCC GGGCGGTGGC
TATGTGACCA GCTACAACGA CATCACCGAT TACAAGCACG CCGAACGCGC GCTGTTGGAG
GCCAACGAAA CACTGGAACA GCGCGTGGCC GAGCGTTCGC ACGAGGCCGA AGTCGCGCAG
CAGTCGAAGA CCCGCTTCCT GGCCGCGATC AGTCATGACG TGCTGCAGCC ATTGAATGCC
GCACGTCTGT TCGCTTCGGC GTTGCGCGAC AGCGATCATG TGAGTGACGA GCAGAAGCAC
CTGGCCGAAC GCGTGGATGC GTCGCTGCGT GCGGCCGAGG AACTGCTTGA TGGCCTGTTG
GATGTGTCGC GGCTGGATGC CGGCGGCCTG CATCCGGTGA TCGGCGAGTT CGACGTGAGC
GCGTTGATGC GCGAGTTGGC CGCGCAGTAC ACCCCGGTCG CCGCCGGTCG TGGCCTGCGC
CTGGACCTGT TCGCGCGCCC GGCGTGGGTG CGCAGTGACC GCCGCCTGCT GCGCCGCGTG
CTGCAGAACT TCCTCGCCAA TGCGCTGCGC TACACGCGCC AGGGCCGCAT CGTGCTGGCG
GTGCGGCAGC GCGGCGACGA GGTGGAACTG CAGGTGTGGG ACACCGGCCC GGGTATTCCC
GAGCACCACA TGCGGCAGAT CTTCGACGAG TTCCATCGCT ACCAGCAGCC TTTCGACTGG
GGTGAGCAGG GGCTGGGATT GGGTTTGTCG ATCTGCCAGC GTATCTCGCG CCTGCTTGAT
CATCGGTTGA ACGCACGCAG CCGCGTGGGC AGTGGTTCGA TGTTCTCGAT CATCCTGCCG
CGGGTGGCAC CGCTGCCGGG CTACACCGAG CTGGTCACAC CTGCACAGAG CGTAGCCGCG
CCAGTGCGCA GTGATTCGCT GGCCGGCCTG CGCGTGCTGT GCGTGGACAA CGACGAAGAG
ATCCTCGACG GCATGCGCGC GCTGCTGGGC CGTTGGCAGG TGCAGGTGAT CACTGCCGCC
ACCGTTGACC AGGCGCTGGA GAAGATCGCC GAGCGCCCGC AGGTGATGCT GGTGGATTAC
CACCTGCACG ACCGCATGGA TGGCCTGGAT GCGCTGGTGG CGCTGCGCGA GGCGGCAGGC
TATGCGCTGC CCGGCGCGCT GCTGACTGCC GATGGTCGCG ACGAGCTGAA GCGGATGGCT
CGCGAACGCG GATACCGCGT GCTGACCAAG CCGATCAAGC CAGCCTCGCT GCGCGCCTTC
CTCGGCGCGC TGCGCGACAC CGGCAGTGGT GATGCCTAG
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| Protein sequence | MVSSWILLLV SVAYAALLFG VAWWGDRRPM YPDRPWLRPV VYSLALAVYC SSWTFYGAVG
TAVRNGVGYL PIYIGPLLLL LFGWRIIERL ALIARSQNVV SIADFISSRF GRSRRLAALV
AIIALIGIIP YLALQYKAVA MSLQVLTGNT GPTGFFSDPA LYVALLMALF ATLFGTRQVD
ATEHHHGMML AIALESVIKL VAMVAVGVFA YVWLSDRNEA VVESVHTLFT GLPPVGFISQ
TLLSFLAIIC LPRQFHVAVV ECGDVRDVRR ARWMFGGYLV LISAMVLPIA TAGVSLFGTG
SSVADDSMVL ALPLAEGRNA LALIAYVGGF SAATGMVIVS SIALATMVSN DLVMPVLLRR
SGDHQEAADV ASRVLWIRRL AILLLALMAY SYYRSSSNDS TLASYGLMAF AAVAQFAPGL
IGGLYWRGAS RRGVETGMLL GFATWLYTLL LPAMTIAGWM DDGWVQNGPF GIAWLRPQQL
FGMTGWDPLT HGTFWSLLVN AATMMLVSAR WRPGVDERLR AAPFLDPYAE RPSVAGGWPG
HVHVGDLLAL ASRVVGERHA RRSFFEQAQS LGRELQSSAP ADRPWVQFTE RLLAASIGAA
SARLLLTSLL RGSGMDLGEV VAVLDEAGQE LRFNREILST TLENISAGVS VVDPDMRLTA
WNRRYQDMFG YPDGMLYVGR PVADLIRYNA ERGELGEGDI EIQINRRIGY MRAGSPHVFE
RTRSDGKVIE MRGQALPGGG YVTSYNDITD YKHAERALLE ANETLEQRVA ERSHEAEVAQ
QSKTRFLAAI SHDVLQPLNA ARLFASALRD SDHVSDEQKH LAERVDASLR AAEELLDGLL
DVSRLDAGGL HPVIGEFDVS ALMRELAAQY TPVAAGRGLR LDLFARPAWV RSDRRLLRRV
LQNFLANALR YTRQGRIVLA VRQRGDEVEL QVWDTGPGIP EHHMRQIFDE FHRYQQPFDW
GEQGLGLGLS ICQRISRLLD HRLNARSRVG SGSMFSIILP RVAPLPGYTE LVTPAQSVAA
PVRSDSLAGL RVLCVDNDEE ILDGMRALLG RWQVQVITAA TVDQALEKIA ERPQVMLVDY
HLHDRMDGLD ALVALREAAG YALPGALLTA DGRDELKRMA RERGYRVLTK PIKPASLRAF
LGALRDTGSG DA
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