Gene Smal_3948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3948 
Symbol 
ID6474832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4443677 
End bp4445098 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content70% 
IMG OID642733151 
Producthypothetical protein 
Protein accessionYP_002030330 
Protein GI194367720 
COG category[S] Function unknown 
COG ID[COG4529] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTACA ATCGGCACAT GACTGATTCA CCGCGTAATG GCGAACTGGA CCTGGCAATC 
ATCGGTGGTG GTGCGGCCGG GGTGCTGGTG GCGATCCAGG TACTGCGCCA GGCCAAGGCG
CCGCTGGCGC TGGCCATCTT CGAACCCGCC TCGCAGCTGG CCCAGGGTAT CGCCTATGCC
ACGCCGTGGC CGGAGCACCT GCTGAACGTG CCGGCGGCGA AGATGAGTGC GTTTGCCGAC
CAGCCCGGCG ATTTCCTCGA CTACCTGATG GCCGCCAATG CCTACCCGGG CGAGGCGCGC
GAGGTGCTGG GCGAGCGCTA TGTGTGCCGC CACTACTTTG CTGCCTACCT GCAGCAGCGC
CTGCAGGAGG CCGCTGCGAC CAGCCCGGCA CAGCTGCAGG TGATCGCGCA GCCGGTGCTG
GGCCTGCAGC CGGATGACCA CGGTTACCAG CTGACACTCG GCGATGGCCA GACGCTGCAC
GCCGCACAGG CCGTGCTGGC CACCGGCAAC AGCATGCGGC CGCTGCCGGT AGCCGGTGCC
GAGGCACTGC CTGCGGATGA CGTGATCGAG GCCTGGGACT ACGACGGCGT GCGCACCCTG
GCCGGCGAAC AGGCTGTAGC CATTGTCGGC TCCGGCCTGA GCATGGCCGA CACCGTGCTG
GCGCTGGTCG CCGCCGGCCA CAGCGGACCG CTGCATGTGA TCTCGCGCCA TGGCCTGCTG
CCGTTGCCGC ACGCGCATGG TGGCCTGCCC ACGTTCGACC CGGCCACGCT GCTGCCGATG
AACCTGCGCC AGCGCCTGCG CGCGTTGCGT GGGTTCGCAC GCCAGGCACA GGCCGACGGC
CTGCCGTGGC AGGGCGTGAT GGACCGCATC CGTCCGCACG GGCAGGCGCT GTGGTGCAGC
CTCGATGGGG CGGACCAGCG TCGCTTCCTG CGCCATGTGG TGCGCTATTG GGACGTGCAT
CGCCACCGCA TCGCCGAAGA AGTGGATGCG CAGCTGCAGT CCCTGCAGGA CAGCGGCCAG
CTGCGTATCC ACCGGTCCCG CCTGCAACGC GTCTGGCGCG ACGGCAATGC GCTGCAGCTG
TCCGGCCGCG ATGCCTCGGG CAATGAACAG CAGTGGACGA TCAGCGGGGT GATCAACGCC
ACCGGCGTGG AGACCCGCGC CAGCGCGCTG CGCAATCCGT TGCTGCAGCA GCTGCAGGCC
GATGGGCTGG CGCGCCCCGG CCCGCACGGG CTGGGCCTGG ACAGCACGGT GCCGGGCGAT
CGCCTGTGTG CCGCCGGTGG CCAGCCGCAG GCACGGCTGG GCGTGCTCGG CAGCCTGCGC
ATCGGCAGCC TGTGGGAAAG CCTGGCGGTG CCTGAACTGC GTCAGCAGGC GCAGGCACTG
GCAACCCAGG TGGTCGCAGG AGCCGCGACG GCGATGCCGT AA
 
Protein sequence
MAYNRHMTDS PRNGELDLAI IGGGAAGVLV AIQVLRQAKA PLALAIFEPA SQLAQGIAYA 
TPWPEHLLNV PAAKMSAFAD QPGDFLDYLM AANAYPGEAR EVLGERYVCR HYFAAYLQQR
LQEAAATSPA QLQVIAQPVL GLQPDDHGYQ LTLGDGQTLH AAQAVLATGN SMRPLPVAGA
EALPADDVIE AWDYDGVRTL AGEQAVAIVG SGLSMADTVL ALVAAGHSGP LHVISRHGLL
PLPHAHGGLP TFDPATLLPM NLRQRLRALR GFARQAQADG LPWQGVMDRI RPHGQALWCS
LDGADQRRFL RHVVRYWDVH RHRIAEEVDA QLQSLQDSGQ LRIHRSRLQR VWRDGNALQL
SGRDASGNEQ QWTISGVINA TGVETRASAL RNPLLQQLQA DGLARPGPHG LGLDSTVPGD
RLCAAGGQPQ ARLGVLGSLR IGSLWESLAV PELRQQAQAL ATQVVAGAAT AMP