Gene Smal_3927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3927 
Symbol 
ID6474811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4420797 
End bp4422194 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content64% 
IMG OID642733130 
Productcytochrome bd ubiquinol oxidase subunit I 
Protein accessionYP_002030309 
Protein GI194367699 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGCGT TGTTGTTGTC CCGGATCCAG TTCGGATTCG TCATCAGTTT CCACGTGCTG 
TTCCCCGCCT TCACCATCGG TACGGCCAGC TGGCTGGCCT TCATCGAATG GCGGTGGCTG
CGCACGAAGT TGCCCGTGTG GCGCGAGCTG TATTTCTTCT GGCAGAAGAT CTTCGCCGTG
TCGTTCGGCA TGGGCGTAGT CAGCGGCATC GTCATGGCCT TCCAGTTCGG CACCAACTGG
CCACGATTGA GCGAGGTGGC CGGTACGGTC ATCGGTCCGT TGCTGACCTA TGAGGTGCTG
ACCGCGTTCT TCCTGGAAGC CAGCTTCCTC GGCGTGATGA TGTTCGGCTG GGGCCGGGTC
TCGCCGCGCC TGCATTTCTT CTCCACCTGC ATGGTGGCGC TGGGCACGCT GTTCTCCACG
TTCTGGATCC TGTCGTCCAA CAGCTGGCTG CATACACCGG CCGGCTACGA GATGGTCAAC
GGCATCGTGC ATCCGGTGGA CTGGTGGCAG GTGGTGTTCA ACCCCTCGTT CCCCTATCGC
CTGGCCCACA TGGCGCTGGG CTCGTTCATC ACCACCTGTT TCGTGATCGG TGGCGTCGGC
GCGTGGTACC TGCGCAAGGG CACACATGTC GAGGCCGGAC GGCGCATGCT GATCGCGGCG
GTGGCGTTCG CCGCACTGAC CGTGCCGGTA CAGATCTTCG TCGGCGACAT GCATGGACTG
AACACGCTCA AGCATCAGCC GATGAAGATC GCGGCGATGG AAGCGCACTG GCATGAAACC
CAGGAAGGCG AGGGCGTGCC GCTGGTGGTG TTCGCGCTGC CGAACGAGAA GGAAGAGCGC
AACGACTTCG AAGTGGCGAT TCCGAAGCTG GGCAGCGTGA TCCTCACCCA CAGCCTGGAC
GGCACCTTCG ATCCGCTCAC CTCGGTGCCG GCCAGCGAGC GGCCGCCGGT GACGCCAGTG
TTCTTTGCCT TCCGCATCAT GGTCGGGCTG GGCACGTTGA TGCTGCTGCT GGCCTGGGTG
TCAGCGTTCC AGCTCTGGCG GAAGAAGCTG CTGGATTCGC CGTGGCTGCT GCGCGGCTGG
AACTGGATGC TGCCGAGCGG CTTCATCGCT CTTCTGTCGG GCTGGTTCGT CACCGAGATG
GGGCGCCAGC CGTGGGTGGT GTATGGCGTG CTGCGCACCG CTGATGCGGT CGGCCCGCAG
AGTGCGTGGA TGACTGCGTT GTCGCTGGGT GTCTATGTGG TTGGCTATGC CTTCGTGTTC
GGCTGGGGCA TCTGGTACCT GGTGAAGATC CTGCGCCATG GGCCGCAGCC GTATGCCGAG
GGGCCGTCGC TGGACCACGG CAGCCACACC CCGGCGCGTC CGTTGTCGGC GGCCGATGAA
CCGCTGGAGG AGCGCTGA
 
Protein sequence
MDALLLSRIQ FGFVISFHVL FPAFTIGTAS WLAFIEWRWL RTKLPVWREL YFFWQKIFAV 
SFGMGVVSGI VMAFQFGTNW PRLSEVAGTV IGPLLTYEVL TAFFLEASFL GVMMFGWGRV
SPRLHFFSTC MVALGTLFST FWILSSNSWL HTPAGYEMVN GIVHPVDWWQ VVFNPSFPYR
LAHMALGSFI TTCFVIGGVG AWYLRKGTHV EAGRRMLIAA VAFAALTVPV QIFVGDMHGL
NTLKHQPMKI AAMEAHWHET QEGEGVPLVV FALPNEKEER NDFEVAIPKL GSVILTHSLD
GTFDPLTSVP ASERPPVTPV FFAFRIMVGL GTLMLLLAWV SAFQLWRKKL LDSPWLLRGW
NWMLPSGFIA LLSGWFVTEM GRQPWVVYGV LRTADAVGPQ SAWMTALSLG VYVVGYAFVF
GWGIWYLVKI LRHGPQPYAE GPSLDHGSHT PARPLSAADE PLEER