Gene Smal_3898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3898 
Symbol 
ID6474782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4388899 
End bp4390113 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content68% 
IMG OID642733101 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002030280 
Protein GI194367670 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.82159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.735977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTG GCATTCCCCT CGCCCTGCTG GCGTTGACCC TCGGCGCCTT CGCCATCGGC 
ACCACCGAAT TCGTCATCGT CGGCCTGATC CCGACCATCG CCGGCGACCT GCAGGTCAGC
CTGCCCTCGG CCGGCCTTCT GGTCTCGCTG TACGCGCTGG GCGTGGCCAT CGGTGCGCCG
GTGCTGACTG CGCTGACCGG ACGCGTACCG CGCAAGCAAC TGCTGGTGGC GCTGATGGTG
TTGTTCACGC TCGGCAATGT CGTCGCCTGG ATGGCACCCG GGTATACCTC GCTGATCATC
GCCCGCATCC TCACCGGCCT GGCGCACGGC GTGTTCTTCT CGATCGGCGC GATCATCGCC
ACCGCCGTGG TGCCGAAGGA GAAGGCGGCC AGTGCGATCG CCATCATGTT CACCGGCCTG
ACCGTGGCAC TGGTGACCGG CGTGCCGCTG GGCACCTTCA TCGGCCAGCA TCTGGGCTGG
CGCGCGACCT TTCTGGCGGT GGCCGGCCTC GGCGTGGTCG CACTGATCGG CGCGCTGTTG
TTCGTTCCGC GCAACCTGCC GCAGAGTGCG CCGGCCAGCC TCCGTCAACA GCTGGCCGTG
CTCGGCCAGC CACGCCTGCT GCTGGTCTAT GCGATGACCG CGCTGGGCTA CGGTGGCACC
TTCCTGGCCT TCACCTATCT GGCGCCGATC CTGCAGGACG TCACCGGCCT TCCGGCCAAC
GCCGTGAGCC TGGTGCTGCT GGTGTACGGC GTGTCGGTGG CGATCGGCAA CCTGTGGGGC
GGGCGCATGG CCGACCGCTT GGGTCCGGTG CCCGCGCTGA AGCGCATCTT CGGACTGCTG
GCACTGGTGC TGTTCGTGCT CACGTTCACT GCCTACAACA CCTGGTTGAT GCTGCTGACG
GTGCTGGCGC TGGGTGCGGT AGCGTTCGGC AACGTGCCCG GCCTGCAGGT CTACGTGGTC
AAGCAGGCGC AGCGCTATGC ACCGCAGGCC ACCGACGTGG CCTCAGGCCT GAACATCGCC
GCGTTCAACG TCGGCATCGC CATGGGCGCC TCGCTGGGCG GCCTGGTGGT GGAGCACATC
GGCCTGATGC ATACCCCATG GCTGGGCGCG CTGGTGGTCG TACTGGCCTA CGCGCTGACC
GTGCTCAGTG GCCGCCTCGA CCGCCGCGAT GGCGTCGACC ACCGCGCCGA CGGCATTGCC
GCCACCGCGC ATTGA
 
Protein sequence
MTRGIPLALL ALTLGAFAIG TTEFVIVGLI PTIAGDLQVS LPSAGLLVSL YALGVAIGAP 
VLTALTGRVP RKQLLVALMV LFTLGNVVAW MAPGYTSLII ARILTGLAHG VFFSIGAIIA
TAVVPKEKAA SAIAIMFTGL TVALVTGVPL GTFIGQHLGW RATFLAVAGL GVVALIGALL
FVPRNLPQSA PASLRQQLAV LGQPRLLLVY AMTALGYGGT FLAFTYLAPI LQDVTGLPAN
AVSLVLLVYG VSVAIGNLWG GRMADRLGPV PALKRIFGLL ALVLFVLTFT AYNTWLMLLT
VLALGAVAFG NVPGLQVYVV KQAQRYAPQA TDVASGLNIA AFNVGIAMGA SLGGLVVEHI
GLMHTPWLGA LVVVLAYALT VLSGRLDRRD GVDHRADGIA ATAH