Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3898 |
Symbol | |
ID | 6474782 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 4388899 |
End bp | 4390113 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642733101 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_002030280 |
Protein GI | 194367670 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.82159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.735977 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGTG GCATTCCCCT CGCCCTGCTG GCGTTGACCC TCGGCGCCTT CGCCATCGGC ACCACCGAAT TCGTCATCGT CGGCCTGATC CCGACCATCG CCGGCGACCT GCAGGTCAGC CTGCCCTCGG CCGGCCTTCT GGTCTCGCTG TACGCGCTGG GCGTGGCCAT CGGTGCGCCG GTGCTGACTG CGCTGACCGG ACGCGTACCG CGCAAGCAAC TGCTGGTGGC GCTGATGGTG TTGTTCACGC TCGGCAATGT CGTCGCCTGG ATGGCACCCG GGTATACCTC GCTGATCATC GCCCGCATCC TCACCGGCCT GGCGCACGGC GTGTTCTTCT CGATCGGCGC GATCATCGCC ACCGCCGTGG TGCCGAAGGA GAAGGCGGCC AGTGCGATCG CCATCATGTT CACCGGCCTG ACCGTGGCAC TGGTGACCGG CGTGCCGCTG GGCACCTTCA TCGGCCAGCA TCTGGGCTGG CGCGCGACCT TTCTGGCGGT GGCCGGCCTC GGCGTGGTCG CACTGATCGG CGCGCTGTTG TTCGTTCCGC GCAACCTGCC GCAGAGTGCG CCGGCCAGCC TCCGTCAACA GCTGGCCGTG CTCGGCCAGC CACGCCTGCT GCTGGTCTAT GCGATGACCG CGCTGGGCTA CGGTGGCACC TTCCTGGCCT TCACCTATCT GGCGCCGATC CTGCAGGACG TCACCGGCCT TCCGGCCAAC GCCGTGAGCC TGGTGCTGCT GGTGTACGGC GTGTCGGTGG CGATCGGCAA CCTGTGGGGC GGGCGCATGG CCGACCGCTT GGGTCCGGTG CCCGCGCTGA AGCGCATCTT CGGACTGCTG GCACTGGTGC TGTTCGTGCT CACGTTCACT GCCTACAACA CCTGGTTGAT GCTGCTGACG GTGCTGGCGC TGGGTGCGGT AGCGTTCGGC AACGTGCCCG GCCTGCAGGT CTACGTGGTC AAGCAGGCGC AGCGCTATGC ACCGCAGGCC ACCGACGTGG CCTCAGGCCT GAACATCGCC GCGTTCAACG TCGGCATCGC CATGGGCGCC TCGCTGGGCG GCCTGGTGGT GGAGCACATC GGCCTGATGC ATACCCCATG GCTGGGCGCG CTGGTGGTCG TACTGGCCTA CGCGCTGACC GTGCTCAGTG GCCGCCTCGA CCGCCGCGAT GGCGTCGACC ACCGCGCCGA CGGCATTGCC GCCACCGCGC ATTGA
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Protein sequence | MTRGIPLALL ALTLGAFAIG TTEFVIVGLI PTIAGDLQVS LPSAGLLVSL YALGVAIGAP VLTALTGRVP RKQLLVALMV LFTLGNVVAW MAPGYTSLII ARILTGLAHG VFFSIGAIIA TAVVPKEKAA SAIAIMFTGL TVALVTGVPL GTFIGQHLGW RATFLAVAGL GVVALIGALL FVPRNLPQSA PASLRQQLAV LGQPRLLLVY AMTALGYGGT FLAFTYLAPI LQDVTGLPAN AVSLVLLVYG VSVAIGNLWG GRMADRLGPV PALKRIFGLL ALVLFVLTFT AYNTWLMLLT VLALGAVAFG NVPGLQVYVV KQAQRYAPQA TDVASGLNIA AFNVGIAMGA SLGGLVVEHI GLMHTPWLGA LVVVLAYALT VLSGRLDRRD GVDHRADGIA ATAH
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