Gene Smal_3877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3877 
Symbol 
ID6474760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4364817 
End bp4365989 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content67% 
IMG OID642733079 
Productchitin-binding domain 3 protein 
Protein accessionYP_002030259 
Protein GI194367649 
COG category[S] Function unknown 
COG ID[COG3397] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.770078 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTCC GATCCACACC GCTGTTGCTG GCCACCTCGT TCGCCGCTGC GGGCCTCTGC 
CTGGCAGGCA GCGCGTTCGC CCACGGTACC ATGACCACGC CGATCAGCCG CGTCTATGCC
TGTTTCCAGG GCAACCCGGA GAATCCGACC AACCCCGCGT GCGCCGCCGC CAAGGCCGTC
GGTGGTTCGC AGGCGTTCTA CGACTGGAAC GGCATCAATC AGGCCAACGC CAACGGCAAC
CACCAGGCCG TAGTGCCCGA CGGCAAGCTG TGCAGCGGCA ACAACCCGAC CTTCCGCGGG
CTGGATGTGA ACCGCAGCGA CTGGCAGACC ACTCCGATCC AGGCAGACGC CAACGGCAAG
TTCACCTTCG TATTCAAGGC AACCGCACCA CATGCCACGC GCGACTGGCG CTTCTTCGTC
ACCCGCGACG GCTGGCAACC GGGCAGCCCA TTGCGTTGGG CCGACCTGCA GGAATTCTGC
ACGCTGGGCA ACACGCCGCT GTCGGCCGAT GGCACCTACA AGCTGCAGTG CACGCTGCCG
CAGCGCAGTG GCCAGCATGT GATCTACAAC ACGTGGCAGC GCTCGGATTC GACCGAAGCG
TTCTACACCT GCATGGACGT GCGCTTTGAA GGAAGCGGCG GCAGCACCCC GCCGGCAGCG
CAGTGGCAGG ACGCCGGCCC GGTCACCGCG CGCGGCGAGC TGCCGGTTGG CACGACCCTG
GCGCTGCGCG TGTTCAATGC CAACGGCAAT GATGTCGAAC GCGTGGAAGC GATCCTGGCC
AACGGCCAGA CCGCGGCCGC GCAATGGCCG TTGGCGCTGG CCCGCAAGGT CAATGCCAGT
GCCCAGCATG CGCGCGTGGG CGTGCTCAAC AACGGCGTGA TCACGCCCTC CGCTTCGGCC
ACCGACAATC GCGTGTACCT GAAGAACGGC AACCGCTTCC AGCTCGACAC CAAGGTGCCG
GACCCGGGCA CGCCGTCACC GGGCGGCGAT TTCGACCACG TATACCCCGC CGGCATCGGC
AGTTACGTGC CGGGCCAGAC CGTGGTGAAG GGCAGCGATG GCAAGCTGTA CGCCTGCCGC
CCGTTCCCGG AAGGTGCATG GTGCAACGTC AACGCCGAAG CCTATCGGCC GGGTGCAGGC
GCGGCCTGGC GTGATGCGTG GATCGCGTAC TGA
 
Protein sequence
MSFRSTPLLL ATSFAAAGLC LAGSAFAHGT MTTPISRVYA CFQGNPENPT NPACAAAKAV 
GGSQAFYDWN GINQANANGN HQAVVPDGKL CSGNNPTFRG LDVNRSDWQT TPIQADANGK
FTFVFKATAP HATRDWRFFV TRDGWQPGSP LRWADLQEFC TLGNTPLSAD GTYKLQCTLP
QRSGQHVIYN TWQRSDSTEA FYTCMDVRFE GSGGSTPPAA QWQDAGPVTA RGELPVGTTL
ALRVFNANGN DVERVEAILA NGQTAAAQWP LALARKVNAS AQHARVGVLN NGVITPSASA
TDNRVYLKNG NRFQLDTKVP DPGTPSPGGD FDHVYPAGIG SYVPGQTVVK GSDGKLYACR
PFPEGAWCNV NAEAYRPGAG AAWRDAWIAY