Gene Smal_3873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3873 
Symbol 
ID6474756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4360402 
End bp4361148 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content66% 
IMG OID642733075 
ProductABC transporter related 
Protein accessionYP_002030255 
Protein GI194367645 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG4555] ABC-type Na+ transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCG CCGACAACCT GCACAAGGCT TTCGACACCC GCACCGGCCG CATCCAGGCG 
GTCTCCAATG TCGGCTTCCG CGCCGAGGAC GGCCGCATCA CCGGCCTGCT GGGCCCCAAT
GGTGCCGGCA AGACCACCAC CATGCGCATG CTGTACACGC TGATGACCCC GGACCAGGGC
AGCATCAGCG TCGATGGTGT CGACGCCGCA CGCAATCCGG TGGAAGTACG CCGCCACCTT
GGCGTGCTGC CCGATGCGCG TGGCGTCTAC AAGCGCCTGA CCGCGCGCGA GAACATCGCC
TACTTCGGCG AGCTGCATGG CCTGTCGGCC GAGCGCATCC GCGAACGCAT CGAAGTGCTG
TCGCATGCCC TGGACATGGG TGACATCCTC GACCGCCAGA CCGATGGCTT CTCGCAGGGC
CAGCGCACCA AGACCGCGAT CGCCCGCGCG CTGGTGCACG ACCCGCGCAA CGTCATTCTG
GATGAGCCGA CCAACGGCCT GGACGTGATG ACCACGCGCG CACTGCGCCG CTTCCTGCTG
GGCCTGCGCG AAGAGGGCCG CTGCGTGATC CTGTCCAGCC ACATCATGCA GGAGGTGGCC
GCGCTGTGCG ATCACATCGT GATCATCGCC AAGGGCACGG TGATGGCTGC CGGCAGCGCC
GATGAACTGC GTGCGCAAGC CGGCGAATCC AACCTGGAAG ACGCGTTCGT GAAACTGATC
GGCAGCGAAG AGGGCCTGCA CGCATGA
 
Protein sequence
MIVADNLHKA FDTRTGRIQA VSNVGFRAED GRITGLLGPN GAGKTTTMRM LYTLMTPDQG 
SISVDGVDAA RNPVEVRRHL GVLPDARGVY KRLTARENIA YFGELHGLSA ERIRERIEVL
SHALDMGDIL DRQTDGFSQG QRTKTAIARA LVHDPRNVIL DEPTNGLDVM TTRALRRFLL
GLREEGRCVI LSSHIMQEVA ALCDHIVIIA KGTVMAAGSA DELRAQAGES NLEDAFVKLI
GSEEGLHA