Gene Smal_3860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3860 
Symbol 
ID6474743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4347578 
End bp4348495 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content67% 
IMG OID642733062 
Productprotein of unknown function UPF0187 
Protein accessionYP_002030242 
Protein GI194367632 
COG category[S] Function unknown 
COG ID[COG3781] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0101759 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATCC GACCCCGTCC CCACGGCTGG CAACTGCTGT ATATCCTGCG CGGCTCGATC 
GTCAAAGCGA TCGCGCCGAA GGTGCTGGCC ATCCTGATCC TGTCCATCGC CGTGGCCGCT
GTGGTGGAAC TGGCACCGCC GACCGGCATC GAGCGCGTCT CGGTCACGCC GTTCACCCTG
CTTGGCCTGG TGCTGTCGAT CTTCCTCAGC TTCCGCAACA GCGCCTGCTA CGAGCGCTGG
TGGGAGGGCC GCAAGCTGTG GGGCCAGCTG GTCTACGAAT CGCGATCGCT GGCCCGCCAG
GTGAACCTGC TGCTGGCCGA TGACACCGGC CGTCGTCGCC GCATCGCCTA CCTCACCACC
GCCTTCGCCC ATGCCCTGGC CGGTCGCCTG CGCGGGCGTA TCGTCGCCCT GGTAGCGCTG
CCGTGGCTGG ACAAGCGCCA GCGCGAACAG CTGGGCCAGC GCGAGAACGT GCCCGACGCG
CTGTTGTCGA TGATCGCCGC CGAACTGGCA CAGGCACTGC GCAGCGGTGA GCTGGACCCG
ATCCTCTACA CCCAGCTGGA AGAACGCCTG CACGCGATGT CGTCGATCCA GGCCGGTTGC
GAGCGCATTC TCACCACGCC GCTGCCGTTC GCTTACACCC TGCTGCTGCA CCGCTGTGCG
TGGATGTTCT GCGTGCTGCT GCCGTTCGGC CTGGCCAGTT CGCTGGGCTG GGGCACGCCG
GTGCTGTCGG CGGTGTTGGC CTATGCCTTC TTCGGCCTGG ACCAGCTGGG CGAAGAAATG
GAAGACCCGT TCGGCCTGGA GCCGAACGAC CTGCCGCTGG ACGCGCTGGT GCGCACGATC
GAGATCGACC AGCTCGACGC GCTCGGCGAA CGCCCCTTGC CCGAACCCCT GCTGCCGCAG
GGCTACCTGT TGCAATAG
 
Protein sequence
MIIRPRPHGW QLLYILRGSI VKAIAPKVLA ILILSIAVAA VVELAPPTGI ERVSVTPFTL 
LGLVLSIFLS FRNSACYERW WEGRKLWGQL VYESRSLARQ VNLLLADDTG RRRRIAYLTT
AFAHALAGRL RGRIVALVAL PWLDKRQREQ LGQRENVPDA LLSMIAAELA QALRSGELDP
ILYTQLEERL HAMSSIQAGC ERILTTPLPF AYTLLLHRCA WMFCVLLPFG LASSLGWGTP
VLSAVLAYAF FGLDQLGEEM EDPFGLEPND LPLDALVRTI EIDQLDALGE RPLPEPLLPQ
GYLLQ