Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3860 |
Symbol | |
ID | 6474743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 4347578 |
End bp | 4348495 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642733062 |
Product | protein of unknown function UPF0187 |
Protein accession | YP_002030242 |
Protein GI | 194367632 |
COG category | [S] Function unknown |
COG ID | [COG3781] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0101759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCATCC GACCCCGTCC CCACGGCTGG CAACTGCTGT ATATCCTGCG CGGCTCGATC GTCAAAGCGA TCGCGCCGAA GGTGCTGGCC ATCCTGATCC TGTCCATCGC CGTGGCCGCT GTGGTGGAAC TGGCACCGCC GACCGGCATC GAGCGCGTCT CGGTCACGCC GTTCACCCTG CTTGGCCTGG TGCTGTCGAT CTTCCTCAGC TTCCGCAACA GCGCCTGCTA CGAGCGCTGG TGGGAGGGCC GCAAGCTGTG GGGCCAGCTG GTCTACGAAT CGCGATCGCT GGCCCGCCAG GTGAACCTGC TGCTGGCCGA TGACACCGGC CGTCGTCGCC GCATCGCCTA CCTCACCACC GCCTTCGCCC ATGCCCTGGC CGGTCGCCTG CGCGGGCGTA TCGTCGCCCT GGTAGCGCTG CCGTGGCTGG ACAAGCGCCA GCGCGAACAG CTGGGCCAGC GCGAGAACGT GCCCGACGCG CTGTTGTCGA TGATCGCCGC CGAACTGGCA CAGGCACTGC GCAGCGGTGA GCTGGACCCG ATCCTCTACA CCCAGCTGGA AGAACGCCTG CACGCGATGT CGTCGATCCA GGCCGGTTGC GAGCGCATTC TCACCACGCC GCTGCCGTTC GCTTACACCC TGCTGCTGCA CCGCTGTGCG TGGATGTTCT GCGTGCTGCT GCCGTTCGGC CTGGCCAGTT CGCTGGGCTG GGGCACGCCG GTGCTGTCGG CGGTGTTGGC CTATGCCTTC TTCGGCCTGG ACCAGCTGGG CGAAGAAATG GAAGACCCGT TCGGCCTGGA GCCGAACGAC CTGCCGCTGG ACGCGCTGGT GCGCACGATC GAGATCGACC AGCTCGACGC GCTCGGCGAA CGCCCCTTGC CCGAACCCCT GCTGCCGCAG GGCTACCTGT TGCAATAG
|
Protein sequence | MIIRPRPHGW QLLYILRGSI VKAIAPKVLA ILILSIAVAA VVELAPPTGI ERVSVTPFTL LGLVLSIFLS FRNSACYERW WEGRKLWGQL VYESRSLARQ VNLLLADDTG RRRRIAYLTT AFAHALAGRL RGRIVALVAL PWLDKRQREQ LGQRENVPDA LLSMIAAELA QALRSGELDP ILYTQLEERL HAMSSIQAGC ERILTTPLPF AYTLLLHRCA WMFCVLLPFG LASSLGWGTP VLSAVLAYAF FGLDQLGEEM EDPFGLEPND LPLDALVRTI EIDQLDALGE RPLPEPLLPQ GYLLQ
|
| |