| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3794 |
|---|
| Symbol | |
|---|
| ID | 6474676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 4266491 |
|---|
| End bp | 4268467 |
|---|
| Gene Length | 1977 bp |
|---|
| Protein Length | 658 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642732995 |
|---|
| Product | cytochrome o ubiquinol oxidase, subunit I |
|---|
| Protein accession | YP_002030176 |
|---|
| Protein GI | 194367566 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
|---|
| TIGRFAM ID | [TIGR02843] cytochrome o ubiquinol oxidase, subunit I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.622698 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGGTA AATTGACGTG GGAGGCCGTG CCACTGCACG AGCCGATCGT GGTGATCACG
CTGGCGGCCA TGGTGCTGGG TGGCCTCGCG CTGCTTGGCG CGGTGACGTA CTTCAGGCTG
TGGGGCCCGC TGTGGCGTGA CTGGTTCACC ACCGTGGACC ACAAGAAGAT CGGCATCATG
TACGTGGTGG TGGCGCTGGT CATGCTGGTG CGTGGCTTTG CCGATGCGCT GATGATGCGC
GCGCAGCTGG CGGCGGCTGG CCCGGGCAGT GACGGCTTCC TGCCACCTGA GCACTACGAC
CAGATCTTCA CCGCGCACGG CGTGATCATG ATCTTCTTCG TGGCCACCCC GTTCGTGGTC
GGCCTGATGA ACATCATCGT GCCGCTGCAG ATCGGCGCGC GCGACATGGC GTTCCCGTTC
CTCAACGCCT TCAGCTTCTG GATCTTCGTG GTCGGCGCAG CGCTGATGAT GATCTCGCTG
GGTGTCGGCG AATTCGCCAT GACCGGCTGG GTGGCCTATC CGCCGCTGTC GGGCATCGAG
TTCAGTCCAG GCGTGGGTGT CGATTACTAC ATCTGGGCGT TGCAGGCTTC GGGCATCGGC
ACATTGCTGA CCGGCGTCAA CCTGTTCATC ACCATCCTGC GCATGCGTGC ACCGGGCATG
ACCCTGATGA AGATGCCGGT GTTCACCTGG ACCGTGCTGG TCACCAGCGT GATCATCATC
GCCGCCTTCC CGATCCTGAC CGTGGCACTG GGTGCGCTCA CCCTGGACCG CTACCTGGAC
TTCAACTTCT ACACCAACAC GTTGGGTGGC AACCCGATGA TGTACGTGAA CCTGGTGTGG
GCCTGGGGCC ACCCGGAGGT GTACATCCTG GTGCTGCCGG CGTTCGGCAT CTTCTCTGAA
GTGACTGCCA CGTTCGCGCG CAAGAAGCTG TTCGGCTACA AGTCGATGGT CGGTGCCACG
CTGGCGATCG GCATCCTGTC GTTCATCGTC TGGCTGCACC ACTTCTTCAC CATGGGCTCC
GGTGCCAGCG TCAATGCCTT CTTCGGCATC ATGACGATGA TCATCGCCAT CCCCACCGGC
GTGAAGATCT TCACCTGGCT GTTCACCATG TACGGCGGCC GCGTCGAGTT CAGCGTGCCG
ATGCTGTGGA CCATCGCCTT CCTGGTCACC TTCACCATCG GTGGCATGAC CGGTGTGCTG
CTGGCCATCC CGGGTGCGGA CTTCCTGCTG CACAACAGCC TGTTCCTGGT CGCGCACTTC
CACAACACCA TCATCGGCGG CGCGCTGTTC GGCTACCTGG CCGGCTTCGC CTACTGGTTC
CCGAAGGTGT TCGGCTTCAC CCTCAACGAG CGCCTGGGCA AGTGGTCGTT CGCCTGCTGG
GTGATCGGTT TCTACCTGGC CTTCATGCCG CTGTACATGC TCGGCTTCAT GGGCATGACC
CGCCGCATGA ACCAGTACGA CAACCCGGCG TGGACGCCGT ACCTGATCGC TGCCTTCATC
GGTGCACTGT TCGTGTTCGC GGGCATCATC CTGATGCTGG TGCAGATCTA CGTGAGCGTG
CGCGACCGCA AGCGCAACCT GGACGTGACC GGCGACCCGT GGAATGCACG CACGCTGGAA
TGGGCCACGC CGTCGCCGCC GCCGTTCTAC AACTTCGCCG TGGTGCCCAA GGCCGATGAG
CTGGATGCCT TCCACGAAGC GAAGAAGCGT GGCCTGCCGC CGCCGCCGAA GAAGTACGCG
CCTATCCACA TGCCGAAAAA CACCGGCGTA CCGCTGATCC TCAACATCTG GATCCTGGTG
CTGTGCTTCG CCCTGGTCTG GCACATCTGG TGGATGGCCG CGGCCAGCTT CATCGCGATG
ATCGTGACCC TGATCGTGCG GTCCTATGAC GAGGACGTGG ACTACTACGT CAGTTCCGAA
GAGGTGGCGC GCACCGAAGC GGCCAACCTT GCCAAGCTGA AGGAGGTACG CGCATGA
|
|---|
| Protein sequence | MLGKLTWEAV PLHEPIVVIT LAAMVLGGLA LLGAVTYFRL WGPLWRDWFT TVDHKKIGIM
YVVVALVMLV RGFADALMMR AQLAAAGPGS DGFLPPEHYD QIFTAHGVIM IFFVATPFVV
GLMNIIVPLQ IGARDMAFPF LNAFSFWIFV VGAALMMISL GVGEFAMTGW VAYPPLSGIE
FSPGVGVDYY IWALQASGIG TLLTGVNLFI TILRMRAPGM TLMKMPVFTW TVLVTSVIII
AAFPILTVAL GALTLDRYLD FNFYTNTLGG NPMMYVNLVW AWGHPEVYIL VLPAFGIFSE
VTATFARKKL FGYKSMVGAT LAIGILSFIV WLHHFFTMGS GASVNAFFGI MTMIIAIPTG
VKIFTWLFTM YGGRVEFSVP MLWTIAFLVT FTIGGMTGVL LAIPGADFLL HNSLFLVAHF
HNTIIGGALF GYLAGFAYWF PKVFGFTLNE RLGKWSFACW VIGFYLAFMP LYMLGFMGMT
RRMNQYDNPA WTPYLIAAFI GALFVFAGII LMLVQIYVSV RDRKRNLDVT GDPWNARTLE
WATPSPPPFY NFAVVPKADE LDAFHEAKKR GLPPPPKKYA PIHMPKNTGV PLILNIWILV
LCFALVWHIW WMAAASFIAM IVTLIVRSYD EDVDYYVSSE EVARTEAANL AKLKEVRA
|
|---|
| |