Gene Smal_3688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3688 
Symbol 
ID6474568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp4151167 
End bp4152486 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content67% 
IMG OID642732887 
Productamidohydrolase 
Protein accessionYP_002030070 
Protein GI194367460 
COG category[R] General function prediction only 
COG ID[COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase 
TIGRFAM ID[TIGR01891] amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.395415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGTT CGTTGCTGCT GTCCGCCCTG CTGCTGGCCT TGCCGGCCCT CGCCCACGCC 
CAGGACGCGC AGCGCCCGGA AGTGACCGCC GCCGCCCAGC GGCTGCAGGC CAAGGTGGTG
GAGTGGCGGC GCGACTTCCA CCAGCACCCG GAGCTGTCCA ACCGTGAGGT GCGCACCTCG
GCCGAGGTCG CCAAGCGCCT GCGTGCGATG GGCCTGAAGC CGAAGACCGG CATCGCCCAC
CACGGCGTGG TGGCGATCAT TGAAGGTGGC AAGCCCGGGC CGAAGATCGC CCTGCGTGCG
GACATGGACG CGCTGCCGGT GACCGAACAG ACCGGCCTGC CGTTCGCCTC CAAGGCCACC
GACCAGTACC GCGGGCAGAC CGTTGGCGTG ATGCATGCCT GTGGCCATGA TGCGCACACC
GCCACCCTGC TCGGCGTGGC CGAAGCGTTG GTGTCGATGA AGAAAGACCT GCCGGGCCAG
GTGATGCTGA TCTTCCAGCC GGCCGAGGAA GGCGCGCCGC CGCCGGAAGA GGGTGGTGCT
GCCCTGATGC TGAAGGAAGG CCTGTTCGCC GACTTCAAGC CGGAAGCCGT GTTCGGCCTG
CACGTCTTCT CAAGCGTGCA GGCTGGGCAG ATCGCCGTGC GTGGTGGCCC GTTGATGGCG
GCTTCGGATC GTTTCGGGAT TAAGGTGATC GGTCGGCAGA CGCATGGCTC GGCGCCGTGG
AATGGTGTTG ATCCGATCGT GGCCACCGCC GACCTGGTCG GCACCGCGCA GACCATCGTC
AGCCGCCGCG CCAACCTGTC CAAGCAGCCG GCGGTACTGA CCTTCGGCGC GATCAACGGC
GGCATCCGCT ACAACATCAT TCCCGATGAA GTGGAGATGG TCGGCACCAT CCGCACCTTC
GATGAAGGCA TGCGCCAGCA GATCTTCGCC GACCTGCGCA ACGTGGCCGA GCACACTGCC
GCCGCGCACG GTGCCAAGGC GGTGACCGAC ATCTACGAGT CTGAAGGCAA CCCGGCCACG
GTGAACGACC CGGCGCTGAC CGCGAAGATG CTGCCGAGCC TGCAGGCGGT GGTGGGCAAG
GACAACGTGT ACGAGCCGCC GCTGCAGATG GGCGCGGAGG ATTTCTCGCT GTACGCGAAG
GAAGTGCCGG GGATGTTCTT CTTCGTCGGT TCGACCAGCA TGGGCATCGA TCCGGCGACG
GCACCGGCGA ACCATTCACC GAAGTTCCTG TTGGACGAGA AGGCGTTGGA TGTCGGGTTG
CGGGCGTTGC TGCAGGTGAG CCTGGATTAC TTGAACGGTG CCGGCACTCC TGCGGGGTGA
 
Protein sequence
MRRSLLLSAL LLALPALAHA QDAQRPEVTA AAQRLQAKVV EWRRDFHQHP ELSNREVRTS 
AEVAKRLRAM GLKPKTGIAH HGVVAIIEGG KPGPKIALRA DMDALPVTEQ TGLPFASKAT
DQYRGQTVGV MHACGHDAHT ATLLGVAEAL VSMKKDLPGQ VMLIFQPAEE GAPPPEEGGA
ALMLKEGLFA DFKPEAVFGL HVFSSVQAGQ IAVRGGPLMA ASDRFGIKVI GRQTHGSAPW
NGVDPIVATA DLVGTAQTIV SRRANLSKQP AVLTFGAING GIRYNIIPDE VEMVGTIRTF
DEGMRQQIFA DLRNVAEHTA AAHGAKAVTD IYESEGNPAT VNDPALTAKM LPSLQAVVGK
DNVYEPPLQM GAEDFSLYAK EVPGMFFFVG STSMGIDPAT APANHSPKFL LDEKALDVGL
RALLQVSLDY LNGAGTPAG