| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3598 |
|---|
| Symbol | |
|---|
| ID | 6474478 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 4052981 |
|---|
| End bp | 4054345 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642732797 |
|---|
| Product | multidrug efflux protein |
|---|
| Protein accession | YP_002029980 |
|---|
| Protein GI | 194367370 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0534] Na+-driven multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTACTG CAACCTCCAC GCCGCGCTTC AGCAAGGAAG TCGGCGCCAC CGGTCTGCTC
GCCCTGCCGC TTGTGCTCGG GCATGTCTCC ACCGGTCTGA TCTCCTTCGT CGACAACGTC
ATTGCCGGCC ACCACGCCAC AGCGACCCTG GCCGCGGTGA CCATCGGCAC GGCGCTCTTG
TGGCTGCCGA TGTTGATCCC GATCGGTACC CTGATCTCGC TCACCGCCTC GGTGTCGCAG
CTGCATGGCG CTGGCCGTGA ACGCGAGATC GGCCCGCTGT TCCGCCAGGC GCTGTGGTTG
GCGCTGGGCC TGGGCCTGAT CATGTTCACC TTCCTCACCG TAGTGCCGCC GTTGCTGCCT
GCGTTCGGCA TCGCGCCGGA CATCGTGCCG GGGGCGACCG CGTTCCTGCA TGCGGTGCGC
TGGGGTGGCC CGGCACTGAC CCTGTACTTC TGCATGCGCT ACCTCAGCGA GGGCATGCAC
TGGACCCTGC CGACCATGCT GATCGGCTTC GGCGGCCTGC TGGTGCTGGC ACCAATGGGT
TACGTGCTGG CCAACGGCAA GCTCGGCTTC CCGGAAATGG GTGCCGAAGG CCTCGGCATC
GCCTCGGCGG TGATGATGTG GCTGCAGGCG ATCGCCTTCG CCACCTACCT GTGGTTCACC
AAGCGCTTCG CCCATCTGCA GCTGTTCTCG CACTTCGAAG GCCCGCGCTG GCCGGCGATC
TGGGACCTGC TGCGCACCGG CCTGCCGATC GGCATCACCG TGCTGATGGA GGGCGGCCTG
TTCATCGTTA CCGCGCTGCT GATCGGCCGC CTCGGTGCCA ATGAAGCGGC CGCGCACCAG
ATCGCGATCA ACGTCGCCCA GCTGTGCTTC ATGATCCCGA TGGGCGTGGC CGAGGCCACC
ACCGTGCGCG TCGGCCATGC GGTCGGCCGT GGCGATGGCT TCGGCGTGCG CCGTGCGGCC
TGGGCCGGCT ACGCGATCAT CATGGGCACG CAGACCCTGT CGGCGGCGGT GCTGCTGTTC
GGCCATGACG CCATCGTCGG TGTCTACACC AACGACCTGG CAGTGGCCGG GCTGGCCTCG
ACCCTGCTGC TGTACGCGGC CACCTTCCAG TTCCCGGATG GCATCCAGGT GCTGTCGGCG
GGCGCGTTGC GCGGCCTGAA GGACACCCGC GTGCCGATGT TCATCGCCAT GTTCGCGTAC
TGGGGCCTGG GCATGCCGCT CGGCGCCGGG CTCGGCCTGG GCCTGGGCAT GGGCCCGCAG
GGCATGTGGA TCGGCCTGAT CGTCGGCCTC ACCGCCGCCG CCATCCTGAT GGGCTGGCGC
CTGCGCCGCA GCAGCCTGCG CATCGGGCAG TCCAGCCTGT CCTGA
|
|---|
| Protein sequence | MSTATSTPRF SKEVGATGLL ALPLVLGHVS TGLISFVDNV IAGHHATATL AAVTIGTALL
WLPMLIPIGT LISLTASVSQ LHGAGREREI GPLFRQALWL ALGLGLIMFT FLTVVPPLLP
AFGIAPDIVP GATAFLHAVR WGGPALTLYF CMRYLSEGMH WTLPTMLIGF GGLLVLAPMG
YVLANGKLGF PEMGAEGLGI ASAVMMWLQA IAFATYLWFT KRFAHLQLFS HFEGPRWPAI
WDLLRTGLPI GITVLMEGGL FIVTALLIGR LGANEAAAHQ IAINVAQLCF MIPMGVAEAT
TVRVGHAVGR GDGFGVRRAA WAGYAIIMGT QTLSAAVLLF GHDAIVGVYT NDLAVAGLAS
TLLLYAATFQ FPDGIQVLSA GALRGLKDTR VPMFIAMFAY WGLGMPLGAG LGLGLGMGPQ
GMWIGLIVGL TAAAILMGWR LRRSSLRIGQ SSLS
|
|---|
| |