Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3591 |
Symbol | |
ID | 6474471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 4044928 |
End bp | 4047402 |
Gene Length | 2475 bp |
Protein Length | 824 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642732790 |
Product | DNA topoisomerase I |
Protein accession | YP_002029973 |
Protein GI | 194367363 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.405231 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAGC ACCTGCTCAT CGTCGAATCG CCGGCCAAGG CCAAGACGAT CAACAAATAC CTCGGCAAGG ACTACACCGT CCTGGCCTCG TATGGGCATG TGCGTGACCT GATTCCGAAG GAAGGCGCAG TCGACCCGGA CAACGGGTTC GCCATGCACT ACGACGTGAT CGACAAGAAC GAAAAGCATG TCGATGCGAT CGCCAAGGCC GCCAAGAGCG CCGACGACAT CCTGCTGGCG ACCGACCCGG ATCGCGAGGG TGAGGCGATC AGCTGGCACA TCGCCGAGAT CCTGAAGGAA CGCGGGCTGG TCAAGGACAA GCCGATGCAG CGCGTGGTCT TCACCGAGAT CACCCCGCGC GCCATCAAGG AAGCGATCAG CCAGCCGCGC GCGATCGCCA GCGACCTGGT CGATGCCCAG CAGGCGCGCC GCGCGCTGGA TTACCTGGTC GGTTTCAACC TGTCGCCGGT GCTGTGGCGC AAGGTACAGC GCGGTTTGTC CGCCGGCCGC GTGCAGAGCC CGGCGCTGCG CATGATCGTC GAGCGCGAGG AAGAGATCGA AGCCTTCATC GCCCGCGAGT ACTGGTCGAT CGCCGCCGAG TGCGCGCACC CGTCGCAGCA CTTCAACGCC AAGCTGATCA AGCTGGACGG GCAGAAGTTC GAGCAGTTCA CCGTCACAGA TGGCGACACC GCCGAGGCGG CCCGCCTGCG CATCCAGCAG GCCGCGCAGG GTGCGCTGCA CGTCACCGAC GTGGCCAGCA AGGAGCGCAA GCGTCGCCCG GCACCGCCGT TCACCACCTC CACGCTGCAG CAGGAAGCCT CGCGCAAGCT CGGCTTCACC ACCCGCAAGA CCATGCAGGT GGCGCAGAAG CTGTACGAAG GCGTCGCGAT TGGTGACGAA GGCACCGTCG GCCTGATCTC GTACATGCGT ACCGACTCGG TGAACCTGTC GCAGGATGCA CTGGCCGAGA TCCGCGACGT GATCGCCCGT GACTACGGCA TCGCCTCGCT GCCGGACCAG CCCAACACCT ACCAGACCAA GTCGAAGAAC GCCCAGGAAG CGCACGAAGC GGTGCGCCCG ACCTCGGCAC TGCGCACTCC TGCGCAGGTC TCGCGTTACC TGACCGATGA CGAGCGCAAG CTGTACGAAC TGATCTGGAA GCGTGCAGTG GCCTGCCAGA TGATCCCGGC CACGCTCAAC ACCGTCAGCG TCGATCTGTC GGCCGGCAGC GACCACGTGT TCCGCGCCAG CGGCACCACC GTGGTGGTGC CCGGCTTCCT GGCCGTGTAC GAAGAAGGCA AGGACAACAA GAGCGCCGAG GACGAGGACG AAGGCCGCAA GTTGCCGGCG ATGAAGCCCG GCGACCGCAT TCCGCTCGAA CGCATCGTCG CCGACCAGCA TTTCACCCAG CCGCCGCCGC GCTTCACCGA AGCGGCGCTG GTGAAGGCGC TGGAAGAGTA CGGCATCGGC CGTCCTTCCA CGTACGCCTC GATCATCCAG ACCCTGCTGT TCCGCAAGTA CGTGGAAATG GAAGGCCGCA GCTTCCGCCC GTCCGATGTC GGCCGCGCGG TGTCCAAGTT CCTGTCCAGC CACTTCACCC GGTACGTGGA CTACGATTTC ACCGCCAAGC TTGAGGACGA GCTCGACGCC GTCTCGCGCG GCGAGGAAGA GTGGATCCCG CTGATGTCGC GCTTCTGGGA ACCGTTCAAG GAACTGGTCG AAGACAAGAA GGAATCGGTC GATCGCGCCG AGGCCAGCGG TGCCCGCGAA CTGGGCACCG ACCCGAAGAC CGGCAAGCCG GTCAGCGTGC GCCTGGGCCG TTTCGGACCG TACGCGGCCA TCGGCAGCAC CGCCGAGGAC GCCGAGGAGA AGCCCAAGTT CGCCTCGCTT CGTCCGGGCC AGTCGATGCA CACCATCACC CTGGAAGACG CGCTGGAGCT GTTCCTGATG CCGCGTGCCC TGGGTGAAGA CAAGGGCGAG GACGTCAGCG TCGGCATCGG TCGTTTCGGC CCGTTCGCCA AGCGTGGCAG CACCTATGCC TCGCTGAAGA AGGAAGATGA CCCGTACACC ATTGACCTGG CCCGCGCCGT GTTCCTGATC GAAGAGAAGG AAGAGATCGC GCGCAACCGG ATCATCAAGG AGTTCGAGGG CAGCGACATC CAGGTGCTGA ACGGCCGCTT CGGCCCGTAC ATCAGCGACG GCAGGATGAA CGGCAAGATC CCCAAGGATC GCGAACCGGC GTCGCTGACC CTGGCCGAAG TACAGCAGCT GATGGAAGAA ACCGGCAAGC CGGTGCGCAA GGGCTTCGGC AAGAAGGCCG CGGCCAAGAA GGCACCTGCG AAGAAGGCGG CGGTGAAGAA GGAGGCGGCA CCGAAGAAGG CCGCCGCCAA GAAGGCCCCT GCCAAGAAAA CGGTGAAGAA GGCTGCCGCG AAGAAGGCGC CAGCCAAGAA GGCCGTCAAG AAGGCCGCGA AGTAG
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Protein sequence | MPKHLLIVES PAKAKTINKY LGKDYTVLAS YGHVRDLIPK EGAVDPDNGF AMHYDVIDKN EKHVDAIAKA AKSADDILLA TDPDREGEAI SWHIAEILKE RGLVKDKPMQ RVVFTEITPR AIKEAISQPR AIASDLVDAQ QARRALDYLV GFNLSPVLWR KVQRGLSAGR VQSPALRMIV EREEEIEAFI AREYWSIAAE CAHPSQHFNA KLIKLDGQKF EQFTVTDGDT AEAARLRIQQ AAQGALHVTD VASKERKRRP APPFTTSTLQ QEASRKLGFT TRKTMQVAQK LYEGVAIGDE GTVGLISYMR TDSVNLSQDA LAEIRDVIAR DYGIASLPDQ PNTYQTKSKN AQEAHEAVRP TSALRTPAQV SRYLTDDERK LYELIWKRAV ACQMIPATLN TVSVDLSAGS DHVFRASGTT VVVPGFLAVY EEGKDNKSAE DEDEGRKLPA MKPGDRIPLE RIVADQHFTQ PPPRFTEAAL VKALEEYGIG RPSTYASIIQ TLLFRKYVEM EGRSFRPSDV GRAVSKFLSS HFTRYVDYDF TAKLEDELDA VSRGEEEWIP LMSRFWEPFK ELVEDKKESV DRAEASGARE LGTDPKTGKP VSVRLGRFGP YAAIGSTAED AEEKPKFASL RPGQSMHTIT LEDALELFLM PRALGEDKGE DVSVGIGRFG PFAKRGSTYA SLKKEDDPYT IDLARAVFLI EEKEEIARNR IIKEFEGSDI QVLNGRFGPY ISDGRMNGKI PKDREPASLT LAEVQQLMEE TGKPVRKGFG KKAAAKKAPA KKAAVKKEAA PKKAAAKKAP AKKTVKKAAA KKAPAKKAVK KAAK
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