Gene Smal_3550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3550 
Symbol 
ID6474429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3993458 
End bp3994645 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content68% 
IMG OID642732748 
Productdrug resistance transporter, Bcr/CflA subfamily 
Protein accessionYP_002029932 
Protein GI194367322 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAATC GACAGGCCCC ACGTTGGGCC CATTCCCTGG CGTCGGCCAT CGTGCTGATG 
GCCCCCTTCG ATCTCCTGGC CTCGCTGGCC ATGGATATCT ACCTGCCTGT GGTTCCTGCA
ATGCCACGCG CGCTGGGCAC CTCGCCGGTG CTGGTGCAGC TGACGCTCAG TGCCTACCTG
CTGGTGCTCG GCGTGGGCCA GCTGGTGTTC GGCCCACTGT CCGACCGCAT CGGGCGGCGG
CCGGTGCTGT TGCTGGGCGC GTTGCTGTTC ACCGTCGCGT CGATAGCGCT GGCGGCGTCC
GGCAGCGGTG CGGCGTTCCT GGCCTGGCGT ACCGTGCAGG CGATCGGTGC ATCGGCGGCG
CTGGTGGCGA CCTTCGCCAC CGTGCGTGAT GTATATGCCG ATACGCCGGA GGGTGCTTCG
CTGTATGGGT TGTTCGCCTC GATGCTGGCC TTCGTGCCCG CGCTCGGTCC GATCCTTGGT
GCGTTGGTGG CAGGCGCATT CGGCTGGCGT GCAATCTTCG CATTGCTGGG CGTGCTCGGC
CTGATCGCCG GCCTGCGCGC GCAACGTCAT TGGCAGGAGA CCCGCCCGCC GCGCAGCGAC
GCGCCAGGCC CGGTGCTGCA GCGCATCCTC CGCAGCGGTG GGTTCTGGGT GTACACGCTG
GGTTTCAGTG CGGGCATGGG CACCTTCTTC GTGTTCTTCT CGATCGCCCC CCGCATCCTG
GTTGGACGCA TGCAGTACTC GCCGCTGTCC TTCGGCTTGG CGTTCGCAAC GGTGGCGCTG
GTGATGATTT TCAGCGCGCG CTTGGCGAAG AGGCTGATCG CCCGCTGGCA GGTGCGCGGG
ACCTTCCTGC GTGGGCTGTG GGTGATGATC GGCGGGGCGT TGCTGATGGC ACTAGCGACG
CTGTGGCCGC CGTCATTCGC CAGCGTGGTG CTGCCGATGT GGGCCATCGC GGTGGGCCTG
GTGATGGTGG TATCGGTGGC TGCCAACGGC GCATTGCGTG ATTTCGCCGA TGCCTCGGGG
ATGGCGGTGG CGCTCTACTA CGCCCTGCAG AGCGTGATCG TTGCCGGCGT GGGGACGTTG
GCTACCGTGC TGCTGCCGGG AGACACGGTG TGGCCGCTGG TGGCCTGTGG GCTGCTGTTG
CCGCTGGCCA GCCTGCTGGC CGCAAGCTGC CTGCCACGTG GCGCATAG
 
Protein sequence
MFNRQAPRWA HSLASAIVLM APFDLLASLA MDIYLPVVPA MPRALGTSPV LVQLTLSAYL 
LVLGVGQLVF GPLSDRIGRR PVLLLGALLF TVASIALAAS GSGAAFLAWR TVQAIGASAA
LVATFATVRD VYADTPEGAS LYGLFASMLA FVPALGPILG ALVAGAFGWR AIFALLGVLG
LIAGLRAQRH WQETRPPRSD APGPVLQRIL RSGGFWVYTL GFSAGMGTFF VFFSIAPRIL
VGRMQYSPLS FGLAFATVAL VMIFSARLAK RLIARWQVRG TFLRGLWVMI GGALLMALAT
LWPPSFASVV LPMWAIAVGL VMVVSVAANG ALRDFADASG MAVALYYALQ SVIVAGVGTL
ATVLLPGDTV WPLVACGLLL PLASLLAASC LPRGA