Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3545 |
Symbol | |
ID | 6474424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3986930 |
End bp | 3988402 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642732743 |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_002029927 |
Protein GI | 194367317 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.482074 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCGCT TCCAACGGCC GGCCCTGGTG CTGGCGGCCT ATCTCGGCAC GTTCCTCGCC TCGCTGGACA TCAGCATCGT CAACGTCGCC CTGCCGACCC TGCAGCTGGC ATTGTGGACC GACATGGCCG GCCTGCAGTG GGTGATCAAC GCCTATGCGA TCGCGCTGTC AGCGCTGATG CTGTCGGCCG GTCCGCTCGG TGACCGCTAT GGCCATCGGC GGATGTGGCT GCTCAGCGTG GCGACCTTCA CCCTGGGCTC GTTGCTCTGC GCCTGCGCCG GCAGCCTGTC GATGCTGGTG GTCGGGCGCG CGGTGCAGGG CGTCGCGGGT GCGCTGTTGA TTCCCAGCGC GATGCCGATC CTCAGTCATG CATTTCCTGA TCCGCGCCAG CGCGCGCGCG CGATCGGTGG CTGGTCGGCG TTCAGTGCGC TGGCCCTGGT ACTGGGACCC ATGCTCGGTG GCGTGCTGGT GCAGCGTGCC GGTTGGCCGA GCATCTTCCT GATCAACCTG CCGCTGGGCC TGCTGGCGCT CGTGCTGGGG GCCTGGGCCA TTCCAGAACG GCGGCATCCG CAGCACGCTG CACTGGATCC GGCCGGGCAG ATGCTCAGCA TCGTTGCCCT GGGCGCGCTC AGCTACGGCC TGATCGCCAT CGGCGAACAC GGACTGATGG TGCCAGGGAC ACTGCTGGCC CTGGGTATCG CCATTGCCGG GCTGATGGCG TTTGGCGTCG TCGAACGTCG TGTGGCGCGC CCTCTGCTCC CCTTGGACCT GTTCGCCAGC CGGCGCTTCG GCATGCTCAA CCTGGCTTCG TTCGTGCTGG GCTTCACCGC CTATGCCAGC CTGTTCTTCC TCTCGCTGTT CTTCCAGCAG GCACAGGGCC ATGAGGCGGT GCTGGCGGGG ACGCAGCTGG TCCCGCAGTT CCTGCTGATG GGCGCGGTGT CGCTGCTGTT CGGCCGGCTG GTCACCCATA TCGGCCTGGC CACCGCACTG GTGTTGGGCT ATGTCCTGAC CGGGGTGGCG CTGTTGGCGA TGACGACGTT CGAACCGGAT ACGTCGCAGG GTCGCGCCAA TGCGTTGCTG ATGCTGCTTG GGGTTGGAAT GGGCCTGGCG GTGCCGGCCA CCGGCATGGC GGTCATGGCC AGCGTACCCC CCGAGCGCGC GGGTATTGCC TCGGCCACGA TGAACGCATT GCGCCAAGCT GGCATGTGCC TGGGAATCGC TTTGCTGGGC AGCCTGATGA GTGTGCGCGC GGTGCAGCAG TTCGCCAGCT CCGCGCGAGC CGCAGGGCAG TCAGGGGTAG CCGAGCAGGC GCGCGCGCTG ATCCTGCGGC CCACCTCGAT GGTGTCCACG CCGCAGATGC TGGCCTGGTA CCGCAGCGCG ATGGCCAGTG GCTTCGGCTG GGCGATGGCC GTGGCGGGTG CCATGGCGCT GCTGGCGGCC ATCGGCCTGC ATCGGCGGCG GTTGCAGGCC TGA
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Protein sequence | MHRFQRPALV LAAYLGTFLA SLDISIVNVA LPTLQLALWT DMAGLQWVIN AYAIALSALM LSAGPLGDRY GHRRMWLLSV ATFTLGSLLC ACAGSLSMLV VGRAVQGVAG ALLIPSAMPI LSHAFPDPRQ RARAIGGWSA FSALALVLGP MLGGVLVQRA GWPSIFLINL PLGLLALVLG AWAIPERRHP QHAALDPAGQ MLSIVALGAL SYGLIAIGEH GLMVPGTLLA LGIAIAGLMA FGVVERRVAR PLLPLDLFAS RRFGMLNLAS FVLGFTAYAS LFFLSLFFQQ AQGHEAVLAG TQLVPQFLLM GAVSLLFGRL VTHIGLATAL VLGYVLTGVA LLAMTTFEPD TSQGRANALL MLLGVGMGLA VPATGMAVMA SVPPERAGIA SATMNALRQA GMCLGIALLG SLMSVRAVQQ FASSARAAGQ SGVAEQARAL ILRPTSMVST PQMLAWYRSA MASGFGWAMA VAGAMALLAA IGLHRRRLQA
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