| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3520 |
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| Symbol | |
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| ID | 6474399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 3956359 |
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| End bp | 3958167 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642732718 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_002029902 |
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| Protein GI | 194367292 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.501053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACGA TTGAAGTCAA GGTTCCCGAC ATCGGCGATT ACAGTGATGT GCCGGTGATC
GAAGTGTTGG TCGCCGTCGG CGACACGGTG AAGAAGGATC AGGGTCTGGT GACCCTGGAG
TCGGACAAGG CCACCCTGGA AGTGCCGTCC TCGGCCACCG GCGTGGTCAA GGAAATCAAG
GTCAAGCTGG GCGACACCCT GTCCGAAGGC GCCGTGGTCG TGGTGCTGGA CGCCGAAGGT
GCCGCCGAAG CCCCGGCCAA GGCCGCCGCG CCGGCCCCGG CAGCGGCCGC TCCGGCCAGC
AAGCCGCCGG TGACCCCGTC GCACCGCGCC CCGGCTGAAC CTGCTGCGCC GAAGCCGGCG
CTGTCCAGCG GCAAGCAGGC CGACATCGAA TGCGAAATGG TCGTGCTGGG CTCCGGCCCG
GGCGGCTACA CCGCTGCCTT CCGCGCCGCC GACGTCGGCC TGGATACGGT GCTGGTCGAG
CGCTACGCCA GCCTCGGCGG CGTCTGCCTC AACGTGGGCT GCATTCCGTC CAAGGCGCTG
CTGCACGCTG CAGCGGTCAT CGACGAAGTG GCCCACGCCG GTGATTTCGG TGTCGAGTTC
GGCAAGCCGA CCATCACCCT GGACAAGCTG CGCCAGTACA AGGAAAAGGT CGTCAACCAG
CTGACCAAGG GCCTGGCCGG CATGGCCAAG CAGCGCAAGG TCCGCAGCGT GCAGGGCGTC
GGCAAGTTTG TCTCTGCCAA CGAGCTGGAA ATCACCGCGG CTGACGGCAG CACCCAGCTG
CTGCGCTTCC AGAAGTGCAT CATCGCCGCC GGTTCGCAGG CAGTGAAGCT GCCGAACTTC
CCGTGGGACG ACAAGCGCGT GATGGATTCC ACCGACGCGC TGGAACTGGC CGAAGTGCCG
GGTTCGCTGC TGGTTGTCGG CGGCGGCATC ATCGGCCTGG AAATGGCCAC CGTGTATGGC
GCGCTGGGCA GCAAGGTCAC CGTGGTCGAG TTCATGGACC AGCTGATGCC GGGCGCCGAC
AAGGACCTGG TCAAGCCGCT GGCTGACCGC CTGAAGAAGC AGGGCATCGA CGTGCACCTG
AAGACCAAGG CCTCCGGCGT CAGCGCCGAT GCCAAGGGCA TCACCGTGAC CTTCGAAGCC
GCCGAGGAAG GCCAGTCGCC CGCGCTGGCG CAGGGCACCT TCGACCGCGT GCTGGTGGCT
GTTGGCCGCT CGCCGAACGG CAAGAAGATC GATGCCGAGA AGGCCGGCGT GCAGGTCACC
GACCGTGGCT TCATCCCGGT GGATCGCCAG ATGCGCACCA ACGTGCCGCA TATCTTTGCC
ATCGGCGATA TCGTCGGCAA CCCGATGCTG GCCCACAAGG CCACGCACGA GGGCAAGCTG
GCCGCCGAAG TGGCTGCCGG CCACAAGAAG GAATGGGTGG CCCGCGTGAT CCCGTCGGTG
GCCTACACCA ACCCGGAAAT CGCCTGGGTC GGCGTGACCG AGACCGAAGC CAAGGCCAAG
GGCCTGAAGG TCGGCGTGGC CAAGTTCCCG TGGGCCGCCA GCGGCCGCGC TATCGGCATC
GGCCGCACCG AGGGCTTTAC CAAGCTGATC TTCGACGAAG AGTCCCACCG CATCATCGGT
GGTGCCATCG TTGGCGTGCA TGCCGGTGAC CTGCTGGCCG AAATCGGCTT GGCCATCGAG
ATGGGTGCCG AAGCCGAAGA CATCGGCCAC ACCATCCATG CCCACCCGAC GCTGAGCGAA
TCGGTGGCGA TGGCCTCGGA AATCTACGAC GGCACGATCA CCGATCTGTA CATGCCGAAG
AAGAAGTAA
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| Protein sequence | MATIEVKVPD IGDYSDVPVI EVLVAVGDTV KKDQGLVTLE SDKATLEVPS SATGVVKEIK
VKLGDTLSEG AVVVVLDAEG AAEAPAKAAA PAPAAAAPAS KPPVTPSHRA PAEPAAPKPA
LSSGKQADIE CEMVVLGSGP GGYTAAFRAA DVGLDTVLVE RYASLGGVCL NVGCIPSKAL
LHAAAVIDEV AHAGDFGVEF GKPTITLDKL RQYKEKVVNQ LTKGLAGMAK QRKVRSVQGV
GKFVSANELE ITAADGSTQL LRFQKCIIAA GSQAVKLPNF PWDDKRVMDS TDALELAEVP
GSLLVVGGGI IGLEMATVYG ALGSKVTVVE FMDQLMPGAD KDLVKPLADR LKKQGIDVHL
KTKASGVSAD AKGITVTFEA AEEGQSPALA QGTFDRVLVA VGRSPNGKKI DAEKAGVQVT
DRGFIPVDRQ MRTNVPHIFA IGDIVGNPML AHKATHEGKL AAEVAAGHKK EWVARVIPSV
AYTNPEIAWV GVTETEAKAK GLKVGVAKFP WAASGRAIGI GRTEGFTKLI FDEESHRIIG
GAIVGVHAGD LLAEIGLAIE MGAEAEDIGH TIHAHPTLSE SVAMASEIYD GTITDLYMPK
KK
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