Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3468 |
Symbol | |
ID | 6476747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3903841 |
End bp | 3905022 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642732666 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_002029850 |
Protein GI | 194367240 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.143252 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCTGA GCCGAATCCG ACCCTTTGCA CTGTCGCTGG CGATCGCCGC GACCGTGGCT GCCTGTGGCG GCCAACCCCA GGCCCCCGAG CAGGGCCCGG GCGATGTCAC CGTGGTAACG CTGAAGTCCG AAACCGTGGG CCTGACCCGC GAACTGCCGG GTCGTACCAA TGCGTTCCTG GTCGCCGAAG TGCGCCCGCA GGTCAATGGC ATCGTCGCCA AGCGCTTGTT CACCGAAGGC GGAATGGTCA AGGCCGGCGA GCCGCTGTAC CAGATCGAGG ACGCCAGCTA TCGCGCCCAG GCCAACAGCG CCCGCGCGCA GCTGGCCCGT GCCGAAGCCA CTGCCAATGC CGCCCGCCTG AGCGCCAAGC GCATCACCGA GCTGGCCAAG GTCGACGCGG TCAGCCAGCA GGATCTGGAA AACGCCGTGG CTGCGCAGAA GCAGGCCGAA GCAGACGTCG GTGCCGCCAA GGCATCGCTG GATGCGGCCA ACGTCACCCT CGGCTACGCG CGCATCACCG CGCCGATCAG CGGCCGCATC GGCAAGTCCA GCGTCACCCA GGGCGCGCTG GTCAGCGCCG GCCAGGCCAC CGCGCTGGCC ACCGTGCAGC AGCTGGACCC GATCTACGTC GACCTCACCC AGTCCTCGGC CGAGCTGCTG CAGCTGCGCC GCGAACTGGC CGCCGGCCGC CTGCAGGACA ACCAGCAGAC CCCGGTCAGC ATCCTGATGG AAGACGGCAG CGAATTCGCC CACAAGGGCA CGCTGGAGTT CTCCGAAGTC AGCGTCGATC CGGCCACCGG CAGCTTCGGG CTGCGGGTCA AGGTCGACAA TCCCGATGGC CTGCTGATGC CCGGCATGTA CGTGCGCGCC GTGATCGGCG GCGGCGTGCG CAGTGATGCG GTGCTGGTGC CGATGCAGGG CATCGCCCGT GATCCGAAGG GCGACACCAG CGCCATGGTG GTCGGCAAGG ACAACAAGGT CGAAGCGCGC CCGGTCAAGG TCAGCCGCAC GGTTGGCGAC AAATGGCTGG TCGAGGACGG CCTGAAGGCC GGCGACAAGG TCATCGTCGA AGGCCTGCAG AAGATCGGCC CGGGCATGCC CGTGAACGTC ACCGAACAGG GTGCCGCTCC GGCCAAGCCG GCTGCCGCCC AACCTGCAGC TGCGGCCGCA GGCGCGAAGT AA
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Protein sequence | MLLSRIRPFA LSLAIAATVA ACGGQPQAPE QGPGDVTVVT LKSETVGLTR ELPGRTNAFL VAEVRPQVNG IVAKRLFTEG GMVKAGEPLY QIEDASYRAQ ANSARAQLAR AEATANAARL SAKRITELAK VDAVSQQDLE NAVAAQKQAE ADVGAAKASL DAANVTLGYA RITAPISGRI GKSSVTQGAL VSAGQATALA TVQQLDPIYV DLTQSSAELL QLRRELAAGR LQDNQQTPVS ILMEDGSEFA HKGTLEFSEV SVDPATGSFG LRVKVDNPDG LLMPGMYVRA VIGGGVRSDA VLVPMQGIAR DPKGDTSAMV VGKDNKVEAR PVKVSRTVGD KWLVEDGLKA GDKVIVEGLQ KIGPGMPVNV TEQGAAPAKP AAAQPAAAAA GAK
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