Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3448 |
Symbol | |
ID | 6476727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3879041 |
End bp | 3880162 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642732646 |
Product | lytic murein transglycosylase B |
Protein accession | YP_002029830 |
Protein GI | 194367220 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.474367 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCACCC TCGGCCTGGT CGCCTGCGCG ACCCAGCCGA AGTCCCCACC GTCTTCGCCC CAGGCCAGCA GTACGCCGCG CCAGCCCGCC GCCAAGGCCC ATGGCCCGGC CGAGGCCGCG CCTGAGGCCG CCGCTGCTAC CGCGCCGCCG GTCGACCTCA CCCCGGTCCC GTTCGAGGTC GCGCGTGCCC GCTTCGTTGC CGATACCGCC AAGCGCTATG GCCTGAAACC GGAGCAGATC AGCAACGTGC TCGACCAGGC TCAGGTGCGC CAGCCGATCA TCGCCGCCAT GTCGCGCCCT GCCGAACGGG TCAAGCCGTG GAACGAATAC CGGCCGATGT TCATCAGCAA GGCGCGCATC GATGGCGGCC GCGCGTTCCT GGCCCAGCAC CGTGCCGAAC TGGATCGCGT GCAGCAGCGC ACCGGGGTGC CGGTCGAAGT GATCGTGGCA ATCATCGGCG TGGAAACCAG CTACGGAAAG AATGCCGGCA ACCATCGCGT GCTCGATGCG CTGTACACGC TGGCGTTCTA TTACCCGCGC AGTGGTGATC CGGCCAAGCT GGAGCGCGAA GTGCGCCGCG AACTGTTCTT CCGCGATGAA CTGGCCAAAC TGTTCGAACT GGGCCGCGAA GAAAACCTGG ACATCACCAC GCTCAAGGGC AGTTATGCCG GTGCGATGGG CATGGGCCAG TTCATGCCGT CCAGCTATCT CGATTACGCC GTGGACGGAA ACGGTGATGG CCGCCGCGAC CTGTTCACCA GCTATGACGA CGTGTTCTCG TCCATCGCCA ATTACTTCGT GAAGAAGGGC GGCTGGGTAC GTGGTGGCCA GGTCGCCGTG CCCGCAACGC TGGCCGCTGG GCGCGAGGAA TTCAACCCGA CCGAGTGGAT GCCCACCTGG TCGCTGGCCG ATCTGGCGCA GCGCGGCTAC CAGCCGAATG CACCGGTGCA GCCGGGTGCC ACCGCCACCC CGATCACCCT GGAAGGCAGC ACCGGCAAGC AGTACTGGCT GGGCTTCCAG AACTACTATG CGATCACCCG CTACAACCTC TCGAAGATGT ATGCGATGGC CGTGTTCCAG TTGTCCCAGG CCATCGCCGG ACAGGAGCTG CCCCCGGCAT GA
|
Protein sequence | MLTLGLVACA TQPKSPPSSP QASSTPRQPA AKAHGPAEAA PEAAAATAPP VDLTPVPFEV ARARFVADTA KRYGLKPEQI SNVLDQAQVR QPIIAAMSRP AERVKPWNEY RPMFISKARI DGGRAFLAQH RAELDRVQQR TGVPVEVIVA IIGVETSYGK NAGNHRVLDA LYTLAFYYPR SGDPAKLERE VRRELFFRDE LAKLFELGRE ENLDITTLKG SYAGAMGMGQ FMPSSYLDYA VDGNGDGRRD LFTSYDDVFS SIANYFVKKG GWVRGGQVAV PATLAAGREE FNPTEWMPTW SLADLAQRGY QPNAPVQPGA TATPITLEGS TGKQYWLGFQ NYYAITRYNL SKMYAMAVFQ LSQAIAGQEL PPA
|
| |