Gene Smal_3448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3448 
Symbol 
ID6476727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3879041 
End bp3880162 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content66% 
IMG OID642732646 
Productlytic murein transglycosylase B 
Protein accessionYP_002029830 
Protein GI194367220 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02282] lytic murein transglycosylase B 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.474367 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACCC TCGGCCTGGT CGCCTGCGCG ACCCAGCCGA AGTCCCCACC GTCTTCGCCC 
CAGGCCAGCA GTACGCCGCG CCAGCCCGCC GCCAAGGCCC ATGGCCCGGC CGAGGCCGCG
CCTGAGGCCG CCGCTGCTAC CGCGCCGCCG GTCGACCTCA CCCCGGTCCC GTTCGAGGTC
GCGCGTGCCC GCTTCGTTGC CGATACCGCC AAGCGCTATG GCCTGAAACC GGAGCAGATC
AGCAACGTGC TCGACCAGGC TCAGGTGCGC CAGCCGATCA TCGCCGCCAT GTCGCGCCCT
GCCGAACGGG TCAAGCCGTG GAACGAATAC CGGCCGATGT TCATCAGCAA GGCGCGCATC
GATGGCGGCC GCGCGTTCCT GGCCCAGCAC CGTGCCGAAC TGGATCGCGT GCAGCAGCGC
ACCGGGGTGC CGGTCGAAGT GATCGTGGCA ATCATCGGCG TGGAAACCAG CTACGGAAAG
AATGCCGGCA ACCATCGCGT GCTCGATGCG CTGTACACGC TGGCGTTCTA TTACCCGCGC
AGTGGTGATC CGGCCAAGCT GGAGCGCGAA GTGCGCCGCG AACTGTTCTT CCGCGATGAA
CTGGCCAAAC TGTTCGAACT GGGCCGCGAA GAAAACCTGG ACATCACCAC GCTCAAGGGC
AGTTATGCCG GTGCGATGGG CATGGGCCAG TTCATGCCGT CCAGCTATCT CGATTACGCC
GTGGACGGAA ACGGTGATGG CCGCCGCGAC CTGTTCACCA GCTATGACGA CGTGTTCTCG
TCCATCGCCA ATTACTTCGT GAAGAAGGGC GGCTGGGTAC GTGGTGGCCA GGTCGCCGTG
CCCGCAACGC TGGCCGCTGG GCGCGAGGAA TTCAACCCGA CCGAGTGGAT GCCCACCTGG
TCGCTGGCCG ATCTGGCGCA GCGCGGCTAC CAGCCGAATG CACCGGTGCA GCCGGGTGCC
ACCGCCACCC CGATCACCCT GGAAGGCAGC ACCGGCAAGC AGTACTGGCT GGGCTTCCAG
AACTACTATG CGATCACCCG CTACAACCTC TCGAAGATGT ATGCGATGGC CGTGTTCCAG
TTGTCCCAGG CCATCGCCGG ACAGGAGCTG CCCCCGGCAT GA
 
Protein sequence
MLTLGLVACA TQPKSPPSSP QASSTPRQPA AKAHGPAEAA PEAAAATAPP VDLTPVPFEV 
ARARFVADTA KRYGLKPEQI SNVLDQAQVR QPIIAAMSRP AERVKPWNEY RPMFISKARI
DGGRAFLAQH RAELDRVQQR TGVPVEVIVA IIGVETSYGK NAGNHRVLDA LYTLAFYYPR
SGDPAKLERE VRRELFFRDE LAKLFELGRE ENLDITTLKG SYAGAMGMGQ FMPSSYLDYA
VDGNGDGRRD LFTSYDDVFS SIANYFVKKG GWVRGGQVAV PATLAAGREE FNPTEWMPTW
SLADLAQRGY QPNAPVQPGA TATPITLEGS TGKQYWLGFQ NYYAITRYNL SKMYAMAVFQ
LSQAIAGQEL PPA