| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3431 |
|---|
| Symbol | |
|---|
| ID | 6476641 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 3860146 |
|---|
| End bp | 3860667 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642732629 |
|---|
| Product | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase |
|---|
| Protein accession | YP_002029813 |
|---|
| Protein GI | 194367203 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase |
|---|
| TIGRFAM ID | [TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.345275 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.00904958 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACGC CCCCCAAGTG CCGTCACCTG AACCGCATGA CCACCGTGCT CCTGAGCCTG
GGCAGCAACG TCCAGCCCCG CCGCTACCTC CACGCCGCGG TGACGGCCCT GCGCGAGCGC
TTCGGCGCGC TGCAGGTGTC ACCCGCCTAC CGTACTGCTG CGGTCGGCTT CGATGGCCCG
GCCTTCCTCA ACAATGCGGT GGCGATCGAG ACCGACCTGC CACTGCAGGA ACTGGACAAC
TGGCTGCATG CGCTGGAAGA CGCGCAAGGG CGTGACCGCA GTGGCCCGCG CTTTTCCGAC
CGGACCCTGG ACATCGATGT GGTGTTCTAC GGCGACCTGG TGGTGGAGGG CCCCGGCCAC
CTGCGCATCC CTCGCCCGGA GCTGAAGCAT GCCTTCGTAC TGAAGCCGCT GGCGGACATC
GCGCCGGAGT TCGTTGACCC GGTCAGCGGC CAGGACCTGG CCACGCTGTG GCGTGCGCAC
AGGCAGTTTG GCGAAGCGTT CGAGGTCGTG GACCTCGAAT GA
|
|---|
| Protein sequence | MSTPPKCRHL NRMTTVLLSL GSNVQPRRYL HAAVTALRER FGALQVSPAY RTAAVGFDGP
AFLNNAVAIE TDLPLQELDN WLHALEDAQG RDRSGPRFSD RTLDIDVVFY GDLVVEGPGH
LRIPRPELKH AFVLKPLADI APEFVDPVSG QDLATLWRAH RQFGEAFEVV DLE
|
|---|
| |