| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3378 |
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| Symbol | |
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| ID | 6476588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 3799533 |
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| End bp | 3800945 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642732576 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002029760 |
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| Protein GI | 194367150 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.469197 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCAG TCACCCTGTT CCGCACCTTC GTTGCGGCCA GCCTGTGCAC GGCCCTGGCT
GCCTGCACGA TGGGTCCGGA CTTCGTACGC CCGCAGGCGG AACTGCCCAG CCACTGGCAG
GGTGAGGCGG TCGCCGGCAA CGCCATCGAC CAGGACGCGG CCTGGTGGGC CGGCTTCGAC
GATCCACTGC TGGCGCAGCT TGCCGGCCAG GTGCTCGCGG CCAACCTGGA CCTGCAGCTG
GCCGCCAACC GCGTGCAGCA GAGCCGCGCC GCACGTGGCA TCACCGCCGC CGATCGCCTG
CCCAGCGTCA GCGCGAGCGC CAGTGGCGTG CGTTCACGCA ACAGCGAGGT GGGCCTGAAT
GATCCGTCCG GCAACGGCGG CCGTGATGAC TACGGGCTGT TCCAGGCCGG CATCGGCCTG
AGCTGGGAAC TGGACCTGTG GGGGCGTGTG CGCCGCCAGG TGGAAGCGGC CGACGCACGC
GTGCAGATGG CCGAGGAGGA TGCACACGCT GTGCGCATCG CGCTGCTGGC GGAAACCGCG
CGTGATTACT TGCAGCTGCG CGCGACGCGG CAGCTGCTGG CGATCACCGA GGACAACCTC
AGCATCGCCC TCGACATGAA GCGCCTGACC GAGGCACGCC AGCAACAGGG CGTGGCCAGC
ACGCTGCAGG TGTCCAGCGC GTCCGCGCAG GTGGCATCGC TGCAGGCCCG CATCGCGCCG
CTGCGGCATC GTGAATCGCA GCTGCGCAAT GCGCTGGCGT TCCTGCTGGC GCAGCCGCCG
CAGGCGCTGG ACGCGCAGCT GCAGGATGCA CGCCGCGACT GGCCGGCGCT GCCGGCCGTA
GCGGTGGGGG TGCCCAGCGA ACTGGCCGAG CGTCGCCCGG ACATCCGTCG TGCCGAAGCG
GCACTGCATG CGGCAACCGC CGGCATCGGC GTGGCCAAGG CCAGTTTCCT GCCGCGCATC
ACCTTGAATG GCGACGCTGG GTTCCAGGCC AAGCAGCTGG ATGATTTGGA TGGCTGGAAC
GCGCACCGCT TCAGCATCGG CCCGTCGATC AGCGTACCGA TCTTCCAGGG CGGGCGGCTG
AAGGCCAACC TCGCGCTGAG CAGGCTGCAG CAGCAACAGT CGGCGCTGCA GTTCCGCCGT
ACCGTGCTGC AGGCCTGGCA TGAAGTGGAC GACGCCATCG ATGGCTATGC CGCCGAGCAG
CAGCGCACGG TGCAGCTGCA TGTGGCGGTG GACGAGAGCG AGAGCGCACT GGGCGCGGCG
CGCCGGCAGT ACCAGGCTGG CGTGGTCGAC ATGCTGGATG TGCTGACCAC CCAGCGCATC
GCGCTGGACA ACCAGGCTGC ACTGGCCAAC AGCCAGGCCA CGGCTGCGAT CGCGCGGGTG
GAGCTGTACC GCGCGCTGGG CGGTGGCTGG TAG
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| Protein sequence | MSAVTLFRTF VAASLCTALA ACTMGPDFVR PQAELPSHWQ GEAVAGNAID QDAAWWAGFD
DPLLAQLAGQ VLAANLDLQL AANRVQQSRA ARGITAADRL PSVSASASGV RSRNSEVGLN
DPSGNGGRDD YGLFQAGIGL SWELDLWGRV RRQVEAADAR VQMAEEDAHA VRIALLAETA
RDYLQLRATR QLLAITEDNL SIALDMKRLT EARQQQGVAS TLQVSSASAQ VASLQARIAP
LRHRESQLRN ALAFLLAQPP QALDAQLQDA RRDWPALPAV AVGVPSELAE RRPDIRRAEA
ALHAATAGIG VAKASFLPRI TLNGDAGFQA KQLDDLDGWN AHRFSIGPSI SVPIFQGGRL
KANLALSRLQ QQQSALQFRR TVLQAWHEVD DAIDGYAAEQ QRTVQLHVAV DESESALGAA
RRQYQAGVVD MLDVLTTQRI ALDNQAALAN SQATAAIARV ELYRALGGGW
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