Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3326 |
Symbol | |
ID | 6476454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 3731318 |
End bp | 3732895 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642732524 |
Product | choline/carnitine/betaine transporter |
Protein accession | YP_002029708 |
Protein GI | 194367098 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1292] Choline-glycine betaine transporter |
TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.188195 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.774831 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGTTTC GCGTTTCCAT CGCACTCGTT CTGCTGCTGG TGCTGCTGGC TGGCTTCGCG CCCGGCCCGT TCAATACCGT CGTTCAGTCG GTACTCGCCG ATGTCATCCG CAGTGTCGGC TGGCTCTATC TTCTGGTCGT GTTCCTGGCG CTGACTTTCC TGATGTACCT GGCATTCGGT CGCTTCGGCA ACCTGCGCAT CGGCGGTGAA GATGCCGAGC CGGAGTTCTC GCGCGCCAGT TGGATGTCGA TGCTGTTCGC CGCCGGCATG GGCATCGGCC TGGTGTTCTG GGGCGCCGCC GAGCCGATTT CCCACTTCAC CAAGCCTCCG GAAGGCCTTG CACCGCAGAG CATGGACGCG GCGCGGGCTT CGATGCGCTA TGCGTTCTTC CATTGGGGCC TGCATCCATG GGCAATCTAC GCGCTGATCG GCCTGGCGAT GGCCTGGTTC CAGTTCAACC GCAATGGCCG TGGACTGGTC AGTGACATGC TGCAACCGAT CATCGGCCGC CACCATCGTG GCTGGATCGG ACGCGTGGTC AACATCGCCG CGGTCGTGGC CACCGCGATT GGCGTTGCCA CCACGCTGGG CTTTGGCACC ATCCAGATCG CTGCCGGCAT GGAACGCGTG TTCGGCCTGC ACGCGGGTGT GCCACTGCAG CTGACCATCA TCGCCATCGC GTTCGTGCTG TACATGGCGT CCACCGCCAG CGGTGTCGAG CGCGGCGTGA AGTGGCTGTC CAACTTCAAT CTTGCGCTGG CCGCGCTTCT TGCGGCCACC GTACTGGTGC TGGGCCCGAC CGGATTCATC TTCGATACGT TCACCACCAC TCTGGGGTCG TACCTCAACC AGCTGGTGAC GATGAGCCTG CGCATGTCGC CGTTCTCGGG CAGCACATGG GTAGCGGACT GGACCATCTT CTACTGGGCG TGGTGGATTT CCTGGGCGCC GTTCGTCGGC TCGTTCATCG CGCGCATCTC GCGTGGGCGC AGCGTCCGCG AGTTCGTCAT CGGCGTCGTG CTGGCACCGA CGGTGCTGGG CTTCTTCTGG TTCGCGGTGT TTGGTGGTAC TGCACTGTGG GCGCAGATCT TCGGCCACGC CGACCTGGTG CAGGCGCTGG GCAACGGCTA TGAGACGGTG CTGTTCACCC TGTTTGACAG CATGCCGCTG CCCTTGCTGC TTTCCTGCAT CGCACTGGTG CTGCTGATGA TCTTCTTCGT GACATCAGCC GATTCGGCGG TGCTGGTGCT GGCCAGCATG TCCACTGACG AGGCAGGCGA TCCGCCGTTG AAGCGCAAGC TGGCCTGGGG CATCGCGGTG GCATTGATCG CAGCCGCATT GCTGCTGGCC GGTGGCCTGG ATGCGCTGCA GGGCATGATC ACGATCGCGG CGTTGCCATT CGCGCTGCTG ATGGTGCTGG TGATGGTGTC GCTGTACCGG GTACTGGACC AGGAGTACAC CCGCGAGCGG CGGCAGGCGC AGCGCCAGCG GCACATGATC GACGCGTGGA TCGCGCGCGA GATGGCGGCG CAGGAAGAGA CCCAGGCGGA GGCGGCGCGC GCGCACGATC AGGATTGA
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Protein sequence | MVFRVSIALV LLLVLLAGFA PGPFNTVVQS VLADVIRSVG WLYLLVVFLA LTFLMYLAFG RFGNLRIGGE DAEPEFSRAS WMSMLFAAGM GIGLVFWGAA EPISHFTKPP EGLAPQSMDA ARASMRYAFF HWGLHPWAIY ALIGLAMAWF QFNRNGRGLV SDMLQPIIGR HHRGWIGRVV NIAAVVATAI GVATTLGFGT IQIAAGMERV FGLHAGVPLQ LTIIAIAFVL YMASTASGVE RGVKWLSNFN LALAALLAAT VLVLGPTGFI FDTFTTTLGS YLNQLVTMSL RMSPFSGSTW VADWTIFYWA WWISWAPFVG SFIARISRGR SVREFVIGVV LAPTVLGFFW FAVFGGTALW AQIFGHADLV QALGNGYETV LFTLFDSMPL PLLLSCIALV LLMIFFVTSA DSAVLVLASM STDEAGDPPL KRKLAWGIAV ALIAAALLLA GGLDALQGMI TIAALPFALL MVLVMVSLYR VLDQEYTRER RQAQRQRHMI DAWIAREMAA QEETQAEAAR AHDQD
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