| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3326 |
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| Symbol | |
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| ID | 6476454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 3731318 |
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| End bp | 3732895 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642732524 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_002029708 |
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| Protein GI | 194367098 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.188195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.774831 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTTTC GCGTTTCCAT CGCACTCGTT CTGCTGCTGG TGCTGCTGGC TGGCTTCGCG
CCCGGCCCGT TCAATACCGT CGTTCAGTCG GTACTCGCCG ATGTCATCCG CAGTGTCGGC
TGGCTCTATC TTCTGGTCGT GTTCCTGGCG CTGACTTTCC TGATGTACCT GGCATTCGGT
CGCTTCGGCA ACCTGCGCAT CGGCGGTGAA GATGCCGAGC CGGAGTTCTC GCGCGCCAGT
TGGATGTCGA TGCTGTTCGC CGCCGGCATG GGCATCGGCC TGGTGTTCTG GGGCGCCGCC
GAGCCGATTT CCCACTTCAC CAAGCCTCCG GAAGGCCTTG CACCGCAGAG CATGGACGCG
GCGCGGGCTT CGATGCGCTA TGCGTTCTTC CATTGGGGCC TGCATCCATG GGCAATCTAC
GCGCTGATCG GCCTGGCGAT GGCCTGGTTC CAGTTCAACC GCAATGGCCG TGGACTGGTC
AGTGACATGC TGCAACCGAT CATCGGCCGC CACCATCGTG GCTGGATCGG ACGCGTGGTC
AACATCGCCG CGGTCGTGGC CACCGCGATT GGCGTTGCCA CCACGCTGGG CTTTGGCACC
ATCCAGATCG CTGCCGGCAT GGAACGCGTG TTCGGCCTGC ACGCGGGTGT GCCACTGCAG
CTGACCATCA TCGCCATCGC GTTCGTGCTG TACATGGCGT CCACCGCCAG CGGTGTCGAG
CGCGGCGTGA AGTGGCTGTC CAACTTCAAT CTTGCGCTGG CCGCGCTTCT TGCGGCCACC
GTACTGGTGC TGGGCCCGAC CGGATTCATC TTCGATACGT TCACCACCAC TCTGGGGTCG
TACCTCAACC AGCTGGTGAC GATGAGCCTG CGCATGTCGC CGTTCTCGGG CAGCACATGG
GTAGCGGACT GGACCATCTT CTACTGGGCG TGGTGGATTT CCTGGGCGCC GTTCGTCGGC
TCGTTCATCG CGCGCATCTC GCGTGGGCGC AGCGTCCGCG AGTTCGTCAT CGGCGTCGTG
CTGGCACCGA CGGTGCTGGG CTTCTTCTGG TTCGCGGTGT TTGGTGGTAC TGCACTGTGG
GCGCAGATCT TCGGCCACGC CGACCTGGTG CAGGCGCTGG GCAACGGCTA TGAGACGGTG
CTGTTCACCC TGTTTGACAG CATGCCGCTG CCCTTGCTGC TTTCCTGCAT CGCACTGGTG
CTGCTGATGA TCTTCTTCGT GACATCAGCC GATTCGGCGG TGCTGGTGCT GGCCAGCATG
TCCACTGACG AGGCAGGCGA TCCGCCGTTG AAGCGCAAGC TGGCCTGGGG CATCGCGGTG
GCATTGATCG CAGCCGCATT GCTGCTGGCC GGTGGCCTGG ATGCGCTGCA GGGCATGATC
ACGATCGCGG CGTTGCCATT CGCGCTGCTG ATGGTGCTGG TGATGGTGTC GCTGTACCGG
GTACTGGACC AGGAGTACAC CCGCGAGCGG CGGCAGGCGC AGCGCCAGCG GCACATGATC
GACGCGTGGA TCGCGCGCGA GATGGCGGCG CAGGAAGAGA CCCAGGCGGA GGCGGCGCGC
GCGCACGATC AGGATTGA
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| Protein sequence | MVFRVSIALV LLLVLLAGFA PGPFNTVVQS VLADVIRSVG WLYLLVVFLA LTFLMYLAFG
RFGNLRIGGE DAEPEFSRAS WMSMLFAAGM GIGLVFWGAA EPISHFTKPP EGLAPQSMDA
ARASMRYAFF HWGLHPWAIY ALIGLAMAWF QFNRNGRGLV SDMLQPIIGR HHRGWIGRVV
NIAAVVATAI GVATTLGFGT IQIAAGMERV FGLHAGVPLQ LTIIAIAFVL YMASTASGVE
RGVKWLSNFN LALAALLAAT VLVLGPTGFI FDTFTTTLGS YLNQLVTMSL RMSPFSGSTW
VADWTIFYWA WWISWAPFVG SFIARISRGR SVREFVIGVV LAPTVLGFFW FAVFGGTALW
AQIFGHADLV QALGNGYETV LFTLFDSMPL PLLLSCIALV LLMIFFVTSA DSAVLVLASM
STDEAGDPPL KRKLAWGIAV ALIAAALLLA GGLDALQGMI TIAALPFALL MVLVMVSLYR
VLDQEYTRER RQAQRQRHMI DAWIAREMAA QEETQAEAAR AHDQD
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