Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3205 |
Symbol | |
ID | 6476259 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3589525 |
End bp | 3591588 |
Gene Length | 2064 bp |
Protein Length | 687 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642732402 |
Product | TonB-dependent copper receptor |
Protein accession | YP_002029587 |
Protein GI | 194366977 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01778] TonB-dependent copper receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.742642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATGA CTTCCCGCCC CGCGGGCGCC TGCGCGCGCC TGCCGGTTGC CCTTGGCCTG GCCGTGACCG CGTCACTGGC TCACGCTGCG CCTGCCGAAG AGGCGCGCAC CCTCGACACG ATGGTGGTGA CCGCCGCTGC ACCGTCCTCG CCGCTGCACT GGGTGACCGA TCCGCGCCTG CCGCGGCAGC CGGTGCCCGC CAGCGACGGT GCTGATTACC TGAAAACCGT CCCCGGCTTC TCCGCCATCC GCAACGGTGG CACCAATGGC GACCCGGTGC TGCGCGGCAT GTTTGGTTCG CGCCTGAACA TCCTCAGCAA CGATGGCAAC CTGATCGGTG CCTGCCCGTC GCGCATGGAC AATCCGCTGT CCTACATCGC GCCGGAAAGC TTCGACCGGC TGACCATCAT CAAGGGGCCG CAGAGCGTGC GCTGGGGCGC GGGCGCGTCG GCCGGCACCG TGCGTTTCGA GCGCGATACG CCGCGCTTCG AGGAACCGGG CCTGCGTGCC GATGCCAGTG CGCTGGTCGG TTCGCGCAAC CGCAACGACC AGGTGCTGGA CCTGACCCTG GGCAATCCGA CCGGTTACGT GCGTGCAAGC GGCAACCGTT CCGAAGCCGA TGACTACAAG GACGGCAATG GCGACGTGGT GCCGTCGAAG TGGCGCAAGT GGAACGGCGA CGTGGCCATC GGCTGGACGC CGGATGCCGA CACGCTGCTG GAAATCTCCG CCGGTGCCGG CGATGCGATC GCGCGCTACG CGGGCCGTGG CATGGACGGT GCCGCGTTCG AGCGCACCAG CTACGCGGCG CGCTTCGAGA AGCGCAACCT GCCGGGTGCG TGGGACACGC TGCAGGCCAA TGTGTACTAC AACGAGGCCG ATCACGTGAT GGACAACTAC ACGCTGCGCA CGCCGAACCC GCACAGCATG ATGCCGATGC CGATGGCCTC TAACGTGGAC CGCCGCACCC AGGGCGGGCG GGTCAGTTCC GAGTGGCGCT GGCAGGATGT GCAGCTGGTG GCCGGTGTGG ATGGAGAGGG CAGTCGTCAC CGCGGCCGCA TGGGCATGGG CCGCGACACC TACCGGCAGG CGGCGTGGGA GACCGATGCC AACTTCCGCC GCTACGGTGC CTTCACCGAA CTCACCCTCG GCGCCGGCAC CGACCAGCGC TGGATCAGCG GGCTGCGCAT CGATCGCGCC AGCGTCCGCG ATGAGCGGCA GTCGGTGCGC GGGATGATGG GCAACCGGCC GAACCCGACC GCTGGCCTGC AGCGCAAGGA ATGGCTGGGC AGTGGTTTCC TGCGCTACGA GCAGGATCTG GCCGACGGCC TGACCTGGTA CGCCGGCCTC GGCCACAGCG AGCGCATGCC CGACTACTGG GAGCTGTTCT CGCCCAACCA GGGACCGGCC GGCGCGGTGA ATGCATTCAG CGGCGTGCAG CCCGAGCGCA CCACCCAGCT TGATGTGGGC ATGCAGTACA AGGGTCCGCG CGTGCACGCT TGGGTCTCGG CGTACGCCGG GCAGATCCAG GACTACATCC TGTTCACCTA CCACGGCAGC GGGATGATGG GCATGAGCCA GGCCCGCAAC GTCGATGCCC GCATTGCCGG TGCCGAGGCG GGCGTGGAAG TGGCGCTGGC CGAACAGTGG AAACTGGGCG GCACGCTGGC CTATGCCTGG GGCGAGAACC GCGACCAGCA GCGACCGTTG CCGCAGATGC CGCCGCTGGA AGCGCGCCTG AGTGCGAACT GGGAAGGCCA GCGCTGGAGT GCTGGCGCCC TGCTGCGGGC GGTGACCCAC CAGCACCGTG TCGCCGATGG CCAGGGCAAC GTGGTCGCGC AGGACCTGGG ACCGAGCGCC GGCTTCGCCA CCTTTGCGCT CAACACCGCC TACCGCTTCA GTTCGCAACT GCAGCTCAGC GCGGGTGTCG ACAACCTGTT TGACCGCGCC TACAGCGAGC ACCTGAACCT GGCCGGCAGT GCCGATTTCG GTTTCCCGGC CGACCCGGTA CGCATCAATG AGCCGGGCCG CAGCGTGTGG ATGAAGGTGA ACTACCGGTA TTGA
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Protein sequence | MKMTSRPAGA CARLPVALGL AVTASLAHAA PAEEARTLDT MVVTAAAPSS PLHWVTDPRL PRQPVPASDG ADYLKTVPGF SAIRNGGTNG DPVLRGMFGS RLNILSNDGN LIGACPSRMD NPLSYIAPES FDRLTIIKGP QSVRWGAGAS AGTVRFERDT PRFEEPGLRA DASALVGSRN RNDQVLDLTL GNPTGYVRAS GNRSEADDYK DGNGDVVPSK WRKWNGDVAI GWTPDADTLL EISAGAGDAI ARYAGRGMDG AAFERTSYAA RFEKRNLPGA WDTLQANVYY NEADHVMDNY TLRTPNPHSM MPMPMASNVD RRTQGGRVSS EWRWQDVQLV AGVDGEGSRH RGRMGMGRDT YRQAAWETDA NFRRYGAFTE LTLGAGTDQR WISGLRIDRA SVRDERQSVR GMMGNRPNPT AGLQRKEWLG SGFLRYEQDL ADGLTWYAGL GHSERMPDYW ELFSPNQGPA GAVNAFSGVQ PERTTQLDVG MQYKGPRVHA WVSAYAGQIQ DYILFTYHGS GMMGMSQARN VDARIAGAEA GVEVALAEQW KLGGTLAYAW GENRDQQRPL PQMPPLEARL SANWEGQRWS AGALLRAVTH QHRVADGQGN VVAQDLGPSA GFATFALNTA YRFSSQLQLS AGVDNLFDRA YSEHLNLAGS ADFGFPADPV RINEPGRSVW MKVNYRY
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