Gene Smal_3203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3203 
Symbol 
ID6476257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3585024 
End bp3588149 
Gene Length3126 bp 
Protein Length1041 aa 
Translation table11 
GC content67% 
IMG OID642732400 
Productacriflavin resistance protein 
Protein accessionYP_002029585 
Protein GI194366975 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGT CCGACACCTC CATCCAGCGG CCGGTGTTCG CCGTGGTGAT GAGCCTGCTG 
CTGCTGGTGC TGGGCGTGAT GTCCTTCACC CGCCTGACCC TGCGCGAACT ACCAGCCATC
GATCCGCCCA TCGTCTCGGT GTCGGTCGAC TACACCGGTG CATCGGCGGC GGTCATCGAA
AGCCGCATCA CCCAGGTGCT GGAAGACGCG CTGGCCGGTA TCGAAGGCAT CGATACCATC
AACGCGCGCA GCAACAACGG CCGTTCGCAG GTCAGCATCG AATTCACCTC CAACCGCGAT
ATCGAGGCCG CGGCCAACGA CGTGCGTGAT GCGGTCAGCC GCGTTGCCGA CCGCATGCCG
GAAGAAGCAC GTCCGCCGGA AATCGCCAAG GTCGAAAGCG ATGCCGACCC GATCATCTGG
TTCAACATGG TCTCCTCGAC CATGGACACG CTGGAGCTGA GCGACTACGC CGACCGCTAT
GTGGTCGATC GTTTCTCCAG CCTCGATGGC GTGGCCCAGG TCCGCATCGG TGGCCGCCAG
CGCTATGCGA TGCGCATCTG GTTGGACCGC GATCAGCTGG CGGCGCGCGG GCTGACCACC
GGCGATGTGG AAACCGCGCT GCGCAACGAA AACGTGGAAC TGCCGGCCGG TCGCATCGAA
TCGACCGACC GCGATTTCAC CCTGCGCGTG GAGCGCAACT ACATCAAGCC CGAAGACTTC
GCGACCATCC CGCTGGGCAA GGGCCGCGAC GGCTACGTGG TGCGCATGGG CGACGTGGCG
AAGATCGAGC TGGCTTCGGC CGAGCGTCGC GCCTACTACC GCAGCAACGG TGAACCGGGC
ATCGGCCTGG GCATCGTCAA GACCTCCACC GCCAACTCGC TGGACGTGGC ACGCACCGCG
CGCGCTGAGG CGGAGCGGGT CGCGCTGACC CTGCCCAAGG GCACGCAGAT TTTCGTTGCC
TTCGACAACA CCACCTTCAT CGAAGCCGCA GTGGACCGTG TCTACGCCAC GCTGGTGGAA
GCGATGATCC TGGTGCTGGC GGTGATCTGG CTGTTCCTCG GCAGCTTCCG CGCTGCACTG
ATTCCGGCAG TGACGGTGCC GGTGTGCCTG GTCGCCGCGT TCATCGCGCT GTATGCGTTC
GACTTCTCGA TCAACCTGCT GACCCTGCTT GCCCTGGTGC TGTGCATCGG CCTGGTGGTG
GACGACGCGA TCGTGGTGGT GGAGAACGTG CAGCGCCGCA TCGATCTGGG TGAACCGCCG
TTGGTGGCGT CCAAACGCGG TACCGCGCAG GTGGCGTTCG CAGTGATCGC CACCACGGCC
GTGCTGGTGG CGGTGTTCCT GCCGGTGGGT TTCCTGGAGG GCAACACGGG ACGGCTGTTC
CGCGAACTGG CAGTGGCGCT GGCCGCGGCG GTGGCGTTGT CCGCGTTCGT GGCGCTGACG
CTGACGCCGA TGATGGCCTC CAAGCTGCTC AAGCCGCATA CCGGGCAGGC GCCGCGTGGC
CTGCATGGTT TCATCAACCG CAACCTGGAG CGCCTGGCCG GCGCCTATGG GCGGGTGCTC
GATCACCATG TCGATCGCAC CTGGATCTAC CTGCTGGTGA TGGTGGCCGC GCTGGCCGCC
AGCTGGGGTC TGCTCAAGCT GCTGCCGTCG GAACTGGCAC CGGCCGAAGA CCGCGGTTCG
TTCCAGATCA TGATCGACGG CCCGGAAGGC GCCGGCTACG ACTACACCGT GCAGCAGGTG
CAGCAGGTGG AAGCGATGCT GGCCCCGCAT GTGGGCGCCG ACAAACCGAT CGTGCGCGCC
AACCCGCGCG TGCCGGGCGG CTGGGGCGCC AGCGAGGAAA TGCATACCGG CCGCGTCAGC
GTGTTCCTGC AGCCGTGGCG CCAGCGCAGC GAAGGCACGC CGGAAGTGGC CAATGAGCTG
CAGAAGGAAC TGGACACCAT CCGCGGCGTG CGCGTACGCA CGCAGGTGGG CGGTGGCCTG
GTGCGCAGTG GCGGCCAGCC GTTCCAGATC GTGCTGGGCG GCCCGGAATA CGCCGAGATC
GCGCAGTGGC GCGACCGCAT CCTGCTGCGC ATGGCCGACA ACCCCGGCCT GGTCGGCCCG
GACTCGGACT ACAAGGAAAC CCGGCCGCAG ATGCGGGTCA ACATCGACCG CCAGCGTGCG
GCCGATCTGG GCGTGCCGGT CACCGCGATC GGTTCGGCGC TGGAAACGAT GATGGGCTCG
CGCCGCGTCA CCACCTTCGT CGACAACGGC GAGGAGTACG ACGTGCTGGT CCAGGCCGGT
CGCGATGGCC GCGCCAGCCC GGCCGACCTC GCCGCGATCC GTGTGCGCGC CACCTCCGGC
GAGCTGGTGC CGCTGTCCAA CCTGGTCACG CTCAGCGAAG TGGCCGAGGC CGGCACCCTG
AACCGCTTCA ACCGCCTGCG CTCGATCACC ATCAATGCTG GCCTTGCGCC GGGCTATCCG
CTGGGCGAGG CGATTGCCTG GGCGCAGCAG GTCACGCGCG AAGAGCTGCC GCAGTACGCG
CAGGTGAACT GGAAGGGCGA ATCGCGCGAA TACCAGAGTG CCGGCGGCGC GGTGCTGCTG
ACCTTCGCCA TGGCGCTGCT GGTGGTGTAC CTGGTGCTGG CCGCACAGTT CGAGAGCTTC
ATCCACCCGC TCACCATCAT GCTGACCGTG CCGCTGGGCG TGCTCGGTGC GCTGGTCGGC
CTGTGGGTCA GCGGTGGCAC GGTGAACCTG TTCAGCCAGA TTGGTATCGT CATGCTGGTC
GGCCTGGCGG CGAAGAACGG CATCCTGATT GTCGAATTCG CCAACCAGCT GCGCGACGAC
GGGAGAACCG TGCGCGAGGC GATCATCGAA TCGGCGATGG TGCGCCTGCG CCCGATCCTG
ATGACCTCGA TCGCCACCGT GGTCGGTGCG GTCCCGCTGG TGGTGGCCGG TGGCCCCGGT
TCGGCCAGCC GTGGCACCAT CGGCATCGTG ATCATCTTCG GCGTGACCCT CTCGACCTTC
CTGTCGCTGT TCGTGGTGCC GGCGTTCTAC GCGCGGCTGG CGCCGTACAC GCGCTCGCCG
GAAGCGGTGA AGCGCGAGCT GGAGAAGCAG GAGGCGGAGT CGCCGTCGGT GGGTGGGCAT
GCCTGA
 
Protein sequence
MKLSDTSIQR PVFAVVMSLL LLVLGVMSFT RLTLRELPAI DPPIVSVSVD YTGASAAVIE 
SRITQVLEDA LAGIEGIDTI NARSNNGRSQ VSIEFTSNRD IEAAANDVRD AVSRVADRMP
EEARPPEIAK VESDADPIIW FNMVSSTMDT LELSDYADRY VVDRFSSLDG VAQVRIGGRQ
RYAMRIWLDR DQLAARGLTT GDVETALRNE NVELPAGRIE STDRDFTLRV ERNYIKPEDF
ATIPLGKGRD GYVVRMGDVA KIELASAERR AYYRSNGEPG IGLGIVKTST ANSLDVARTA
RAEAERVALT LPKGTQIFVA FDNTTFIEAA VDRVYATLVE AMILVLAVIW LFLGSFRAAL
IPAVTVPVCL VAAFIALYAF DFSINLLTLL ALVLCIGLVV DDAIVVVENV QRRIDLGEPP
LVASKRGTAQ VAFAVIATTA VLVAVFLPVG FLEGNTGRLF RELAVALAAA VALSAFVALT
LTPMMASKLL KPHTGQAPRG LHGFINRNLE RLAGAYGRVL DHHVDRTWIY LLVMVAALAA
SWGLLKLLPS ELAPAEDRGS FQIMIDGPEG AGYDYTVQQV QQVEAMLAPH VGADKPIVRA
NPRVPGGWGA SEEMHTGRVS VFLQPWRQRS EGTPEVANEL QKELDTIRGV RVRTQVGGGL
VRSGGQPFQI VLGGPEYAEI AQWRDRILLR MADNPGLVGP DSDYKETRPQ MRVNIDRQRA
ADLGVPVTAI GSALETMMGS RRVTTFVDNG EEYDVLVQAG RDGRASPADL AAIRVRATSG
ELVPLSNLVT LSEVAEAGTL NRFNRLRSIT INAGLAPGYP LGEAIAWAQQ VTREELPQYA
QVNWKGESRE YQSAGGAVLL TFAMALLVVY LVLAAQFESF IHPLTIMLTV PLGVLGALVG
LWVSGGTVNL FSQIGIVMLV GLAAKNGILI VEFANQLRDD GRTVREAIIE SAMVRLRPIL
MTSIATVVGA VPLVVAGGPG SASRGTIGIV IIFGVTLSTF LSLFVVPAFY ARLAPYTRSP
EAVKRELEKQ EAESPSVGGH A