Gene Smal_3173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3173 
Symbol 
ID6476144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3555353 
End bp3556465 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content58% 
IMG OID642732369 
Productglycosyl transferase group 1 
Protein accessionYP_002029555 
Protein GI194366945 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGTCC TCATGCTCTG CAAGCGGCAG TACACCGGAC AGGACCTTCT CGATGACCAG 
TATGGAAGAT TGTATGAGCT GCCAGAAGGC CTAGCTCGCC TGAGCATCCA GATCAGCGGC
ATTGCCTTGA GCTATCGGCC TCGCCCGGCC GTAGAGCATC TGTCTTTGTG CGGCGTTCAA
TGGCAATCAA TCAATGCCAT TCCGAAGGGC CCCTTCCGCT TGCCGGGATA CATCCAAGAC
GTTCATCAAC GAAACCCGGT GGATATCGTG CTAGCGGCCT CGGATGCACC ATGCTGCATC
CTCGGCATGA AGATCGCAAA GCGACTCGCC GTACCTTGTG TGCTCGATCT TTATGACAAT
TACGAGAGCT TTGGCCTTAC CCGTATCCCA GGACTAAAAG CAGCCTTCAG GAATGCATGC
AGATCCGCCG ATGGGATCAG TACTGTCACT CACGCACTAG CTGACCATGT CCGGGAAACC
ATTGACCCGC GGGGCCCGGT GCAGGTGATT GCCAATGCAG TGAGGACCGA CATCTTCCAC
ACCATGGACA AGCTGGATTG CCGGCGGAGC CTGGGACTGC CTACCACCTC GCGCTTGATC
GGCTGTGCTG GCGCCATCGA CCAAAGCCGT GGCATCTCCG ATATGTTTCA GGCATTTCAC
CAACTGGCGG AGCGCGATGC CGATCTTCAT TTGGTGATTG CTGGCCGCAG GAGCGGCACA
GCAGCTCGTT TTAACCACCC TCGTCTGCTG GACCTGGGCA TGCTGGACTG GCAACGTGTG
CCGATACTGC TTAATGCATT GGATGTGGCC ATCACCTGCA ACCGCAGCTC ATCCTTTGGA
CGCTACTGCT ACCCGCTCAA GCTTGCCGAG AGCCTGGCAT GTCGAATACC CGTGGTCACC
GCCAACGTGG GCGACGCTGT TGCAATGGTC CAGAACGAGA CCGCCTGTCT CTATACGCCC
GGTGACGCAG AAGGGTTGGC CGCTGCAATC AGCGGCCAGC TATCCGCCCC CAAGCACCCT
TCATTGACGG GGATAAGCGA CTGGCAGGAC CGGGCGGCGG TATTGGCTGA CCTGCTGGAG
TTGGCGGTCC AGTCCGCAGG TGTAACTCAC TGA
 
Protein sequence
MHVLMLCKRQ YTGQDLLDDQ YGRLYELPEG LARLSIQISG IALSYRPRPA VEHLSLCGVQ 
WQSINAIPKG PFRLPGYIQD VHQRNPVDIV LAASDAPCCI LGMKIAKRLA VPCVLDLYDN
YESFGLTRIP GLKAAFRNAC RSADGISTVT HALADHVRET IDPRGPVQVI ANAVRTDIFH
TMDKLDCRRS LGLPTTSRLI GCAGAIDQSR GISDMFQAFH QLAERDADLH LVIAGRRSGT
AARFNHPRLL DLGMLDWQRV PILLNALDVA ITCNRSSSFG RYCYPLKLAE SLACRIPVVT
ANVGDAVAMV QNETACLYTP GDAEGLAAAI SGQLSAPKHP SLTGISDWQD RAAVLADLLE
LAVQSAGVTH