Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3160 |
Symbol | |
ID | 6476131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 3537953 |
End bp | 3538822 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642732356 |
Product | outer membrane assembly lipoprotein YfiO |
Protein accession | YP_002029542 |
Protein GI | 194366932 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTCTG CGCCCGTCCG CCTCACCGCC CTGTTGCTGG TGCTGGTCAT CGCTGCCACC GGCTGCCACC GTGGTGCCAA GAAGGGCGAT CGCCCCGATG AAGGGACGCC GGTCGAACAG TTGTACGAGA AGAGCCACAA GCTGATGCAG GGTGGCAACT GGAGCGGTGC TGAGTCCAGC TTCCGCCGCC TGGTGGCCCA GTATCCGTAC GGCCCGTACA CCGAACAGGC GATGATCGAA ACCGCCTATG CCCAGTACAA GGCCGGCAAG CACGATGACG CGGTGTCCAG CATCGACCGC TTCATCCGTA CCTATCCGAC CCACCGCAAC ATCGCCTACC TGTACTACCT GCGCGGCCTG GCCAACTCCA ACCGCAGTAC GGTTTTCCTG CGCCACGTAT GGTCGCTGGA TGCAAGCCGC CGCGACCTGT CCACGCCGCA CCAGGCGTAC TCGGACTTCA ACATCGTGGT CGACCGCTAC CCGAACAGCC GCTACGCCGC CGATGCGCGC CAGCGCATGC TGGAGCTGCG TGACGTGTTC GCCCAGCATG AGCTGGACAA CGCCCTGTAC TACATGCGCC GTGGCGCCTG GGTCTCGGCC GCGGGCCGCG CCAACTACCT GCTGGAAACC TACCCGCAGA GCGCCTTCCA GTACGACGCC GTCGCCGTCC TGGCTGATTC CTACACCCAC CTGGGCAACA AGACCCTGGC CGACGACGCC CGCCGCGTCC TGCAGCTGAA CCAGCCGGAC CACCCGTGGC TGGAAGGCAA GTGGCCGAAG TACCCGTGGA TGATCCGCAA GCTGAACCCG TTCGCCGGCG AGAAGTCCGC CAGCACCGGC CAGCGCAACG CGCGACTGGA AAAGAAGTAA
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Protein sequence | MLSAPVRLTA LLLVLVIAAT GCHRGAKKGD RPDEGTPVEQ LYEKSHKLMQ GGNWSGAESS FRRLVAQYPY GPYTEQAMIE TAYAQYKAGK HDDAVSSIDR FIRTYPTHRN IAYLYYLRGL ANSNRSTVFL RHVWSLDASR RDLSTPHQAY SDFNIVVDRY PNSRYAADAR QRMLELRDVF AQHELDNALY YMRRGAWVSA AGRANYLLET YPQSAFQYDA VAVLADSYTH LGNKTLADDA RRVLQLNQPD HPWLEGKWPK YPWMIRKLNP FAGEKSASTG QRNARLEKK
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