| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3159 |
|---|
| Symbol | |
|---|
| ID | 6476130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 3536832 |
|---|
| End bp | 3537821 |
|---|
| Gene Length | 990 bp |
|---|
| Protein Length | 329 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642732355 |
|---|
| Product | pseudouridine synthase, RluA family |
|---|
| Protein accession | YP_002029541 |
|---|
| Protein GI | 194366931 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAC AACCCTCTGA ATCGGCCCGC CAGGCCATCG TCCCCGACAC CTCTGCCGGC
CGCCGTTTCG ACGCGGTCGT GGCCGAATTG TTCCCCGAAT ACTCGCGTTC GCGCCTGACC
GAGTGGATCA AGAACGGCGA TGTCCTGCTG GACGGCGCCC AGGCCCGCCC GCGCGATCCG
CTGCGCGGCG GCGAGGTGGT CACCCTCACC GTGGTGCTGG AAACCCAGAC CGACGCCCAG
CCGGAGGACA TCCCGCTGGA CGTGCTGTTC GAGGACGAGT ACCTGCTGGT GATCAACAAG
CCGGTCGGCC TGGTGGTGCA CCCCGGCGCC GGCAACCACA GCGGTACCCT GGTCAACGCC
CTGCTGTTCC GCGACCCGTC GGTGGCGGTG CTGCCGCGCG CCGGCATCGT GCATCGCCTG
GACAAAGACA CCAGCGGCGT GATGGTGGTG GCCAAGACCC TGGAGGCGCA GACCGCGCTG
GTCGAGCAGC TGGCCGCACG CGACGTGCAC CGCCAGTACC TGGCCATCGT GATGGGCGCA
CTGGTGGCCG GCGGCACTGC CGATGCGCCG ATCGACCGCC ACCCGCGCGA CCGCCTGAAG
ATGGGCGTGC GCGAGGATGG CAAGGAAGCG GTGACCCATT ACCGCCTGCG CGAGCGCTTC
CGTGCACATA CCGCACTGGA ATGCCGTTTG GAAACCGGTC GTACCCACCA GATCCGCGTG
CACATGGCGC ACATCCGTCA CCCGATCGTG GGCGATCCGC TGTATGGCGG CGCGCTGAAG
CTGCCCAAGG GCGCCAGCGA CGAGCTGGTA GCCGCGCTGC GCGGCTTCAA GCGCCAGGCG
CTGCATGCCG AGACGCTGGA GTTCGTGCAC CCGATCACCG GTGAGACGGT GCGCAACACC
GCGCCGGTGC CGGCCGACAT GCTGCACCTG CTGAAGGTGC TGCGCGAAGA CAGTGACGCC
TTCGCCGCAC GCGAGCGGGA CCGCTGGTGA
|
|---|
| Protein sequence | MSEQPSESAR QAIVPDTSAG RRFDAVVAEL FPEYSRSRLT EWIKNGDVLL DGAQARPRDP
LRGGEVVTLT VVLETQTDAQ PEDIPLDVLF EDEYLLVINK PVGLVVHPGA GNHSGTLVNA
LLFRDPSVAV LPRAGIVHRL DKDTSGVMVV AKTLEAQTAL VEQLAARDVH RQYLAIVMGA
LVAGGTADAP IDRHPRDRLK MGVREDGKEA VTHYRLRERF RAHTALECRL ETGRTHQIRV
HMAHIRHPIV GDPLYGGALK LPKGASDELV AALRGFKRQA LHAETLEFVH PITGETVRNT
APVPADMLHL LKVLREDSDA FAARERDRW
|
|---|
| |