Gene Smal_3155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3155 
Symbol 
ID6476126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3533686 
End bp3535050 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content67% 
IMG OID642732351 
Productalpha,alpha-trehalose-phosphate synthase (UDP-forming) 
Protein accessionYP_002029537 
Protein GI194366927 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0380] Trehalose-6-phosphate synthase 
TIGRFAM ID[TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCGTC TTGTGGTGGT TTCAAACCGC GTGGCCGTGC CGGGCGAGAA CCGCGCCGGC 
GGCCTGGCGG TGGGCCTGCT GGCCGCGTTG AAGGAACGCG GCGGCATGTG GTTCGGCTGG
AGTGGCAAGA GCGTGCGTGA TGGCAGTGGC ACGCTGCACC GGCAGAAGGA CGGCGACATC
GAGTTCGTCA CCCTGGACCT GAGCAAGCGC GAGGTCGATG GCTACTACAA CGGCTTCGCC
AACCGCACGC TGTGGCCGCT GCTGCATTTC CGCCTGGACC TGGTCGATTA CGATCGCGGC
ACCCGCGAGA CCTACCACAA GGTCAACGCG CTGTTCGCCG ACAAGCTCGC ACCGCTGCTG
CGCGAGGACG ACATCGTCTG GATCCACGAC TACCACCTGA TTCCGCTGGG CGCGATGCTG
CGCGAACGGG GCATCGGCTG CCGCATCGGT TTCTTCCTGC ACATCCCGAT GCCCTCGGCC
GACCTGCTGC AGGCGATGCC GGACCATCTG CGGTTGTTCT CGGCGCTGTA TGCCTACGAT
CTGGTCGGCT TCCAGACCCA GCGTGACGCC GACCGTTTCC AGACCTACCT GCGCCTGTTC
GGTGGCGGCA AGGTACTCGA GAACGGCGAA CTGGAAGCAC CGGGGGGACG CCGCTTCCGC
GCGGCCGCCT TCCCGATCGG CATCGATACC GAACTGATCG CCCGCCAGGC TGGCACCGCC
GCCACCAAGG CAGCGGTGAA GAACCTGCGC GGCAGCCTGC GCGACCGCCA GCTGGCGATC
GGCGTGGACC GCCTGGACTA TTCCAAGGGC CTGCCCGAGC GCTTCCTCGG CTTCGAGCGC
TACCTGGAAC GGCATCCGGA CCAGCACGGC TCGCTGACCT ACCTGCAGAT CGCCCCGGTC
TCGCGCGGCG ATGTCACCGA GTACCGCCAG CTGCGCAGCC AGCTGGAACA GATCGCCGGG
CACATCAATG GCGGCCACGC CGCACCCGAC TGGACCCCGC TGCGCTACGT CAACCAGAAC
TTCACCCATG CCACGTTGAC CGGCTTCTAC CGCGCTGCGG CGGTGGGCCT GGTCACCCCG
CTGCGCGATG GCATGAACCT GGTGGCCAAG GAGTACGTGG CCTCGCAGGA TCCGGAAGAT
CCCGGCGTAC TGGTGCTGTC GCTGCTGGCC GGTGCCGCCG ACGAACTCAA GCAGGCGTTG
CTGGTGAACC CGCATGACCT GGACGGCGTC GCCGATGCCA TCGCCACCGC AGCAACGATG
TCACTGCACC GGCGCAAGGA GCGCTGGCAC GCAATGATGG AGCACCTGCG CACCTACGAC
ATCAATCATT GGCGCCGCAG CTACCTGGAC GCGCTGGAAG GCTGA
 
Protein sequence
MSRLVVVSNR VAVPGENRAG GLAVGLLAAL KERGGMWFGW SGKSVRDGSG TLHRQKDGDI 
EFVTLDLSKR EVDGYYNGFA NRTLWPLLHF RLDLVDYDRG TRETYHKVNA LFADKLAPLL
REDDIVWIHD YHLIPLGAML RERGIGCRIG FFLHIPMPSA DLLQAMPDHL RLFSALYAYD
LVGFQTQRDA DRFQTYLRLF GGGKVLENGE LEAPGGRRFR AAAFPIGIDT ELIARQAGTA
ATKAAVKNLR GSLRDRQLAI GVDRLDYSKG LPERFLGFER YLERHPDQHG SLTYLQIAPV
SRGDVTEYRQ LRSQLEQIAG HINGGHAAPD WTPLRYVNQN FTHATLTGFY RAAAVGLVTP
LRDGMNLVAK EYVASQDPED PGVLVLSLLA GAADELKQAL LVNPHDLDGV ADAIATAATM
SLHRRKERWH AMMEHLRTYD INHWRRSYLD ALEG