Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3154 |
Symbol | |
ID | 6476125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 3531908 |
End bp | 3533689 |
Gene Length | 1782 bp |
Protein Length | 593 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642732350 |
Product | glycoside hydrolase 15-related |
Protein accession | YP_002029536 |
Protein GI | 194366926 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAAC CCGATCTTGA TCTGGGCGTG GTCGGCAACG GCAGCTTCGG CGCCCTGGTC GACAAACATG CCCGCGTTGT CTGGAGCTGC CTGCCCACCT TCGACGGCGA CCCCACCTTC TGTGCCCTGC TCGGCCCCAA CCAGCAGACC GGCGGCGACT TCGCCATCGA GCTGGAGGAT TTCAGCAGCA GCGAGCAGGA ATACCTGACC AACACCGCGA TCCTGCGCAC CGTGCTGCAC GACAGCCACG GCGGCTCGCT GGAAATTCTC GACTTCGCTC CGCGCTGGCG CCAGAACGAT CGCTTCTACC GCCCGGTGAG CCTGATCCGC CAGGTGCGTC CACTGGCGGG CAGCCCGCGC ATCACCGTAC GCGCGCGGCC GCTGGCCGAC TGGGGCGCAC GCGTACCCGA GTCCACCTGG GGCAGCAACC ACGTGCGCTG GATCCTGCCC GAACACGTAC TGCGGCTGAC CACCGACGTG CCGGTGCGCC TGGTGCGCGA CGGCCTGCCC TTCGTGCTCA ACCATCCGGT CCACCTGATC CTGGGCGTGG ACGAATCGCT CGACCGCTCG ATCAGCGGCT ACGTGCAGGA CGCCTTCCAG CGCACCCGCG ACTACTGGCG CGAATGGGTG CGCTACCTGT CCATTCCGCT GGAATGGCAG GACGCGGTGA TCCGCAGTGC GATCACCCTC AAGCTGTGCC AGTACGAGGA CAGCGGCGCG ATCATCGCGG CGATGACCAC CTCCATTCCC GAAGCGCCCG GCAGCGTGCG CAACTGGGAC TACCGTTACT GCTGGCTGCG CGATGCCGCG TTCGTGGTGC GTGCGCTGAA CCGCCTCGGC GCGACGCGCA CGATGGAACA GTTCCTCGGC TACATCTTCA ACCTGGCCAG CAACGACGGC ACCCTGCAGC CGCTGTATGG CATCGGCTTC GAAGCCAAGC TGGACGAGGA CGAAGTGCCC AGCCTGTCCG GTTACCGCGG CATGGGGCCG GTGCGCCGCG GCAACCTGGC CTGGGTGCAG CGCCAGCACG ATGTCTATGG CAGCGTGGTA CTGGCCTCCA CCCAGCTGTT CTTCGATCGT CGCCTGCAGG ATCCCGGCGA CGCGCACACC TTCGCGCGGC TGGAACCACT CGGCGAGCAG GCCTTCGCCC TGCATGACGT ACCGGATGCC GGCCTGTGGG AGTTCCGCGG CCGCACCGAA GTACATACCT ACACCAGCGC GATGTGCTGG GCCGCCTGCG ACCGCCTGTG CAAGATCGCC GTGCGCCTGA AGCGCGATGA CCGCGCACGC TACTGGCGCG AGCGCGCCGA CACCATCCAC GCCCGCATCA TGGCTGAGGC CTGGAGCGAA GAACGGGGCC ACTTCACCGA TACTTTCGGT GGTCACCGCC TGGATGCGTC GTTGCTGTTG CTGGCCGACA TCGGCTTCAT CGACGCGATG GACGCCCGCT TCGTCGCCAC CGTCGAGGCC ATCGGCCGTG ACCTCAAGCA TGGCAACTCG CTGTACCGCT ATGTCGCCCC GGATGACTTC GGTGAACCGG AAACCAGCTT CACCATCTGC ACGTTCTGGT ACATCGACGC GCTGGCCGCG ATTGGCCGCA TGGAAGAAGC GCGCGAGATG TTCGAGCTGC TGTTGAAGCA GCGCAATCAT CTGGGCCTGC TGTCGGAGGA CCTGGCCTTC GACAGCGGCG AGGCCTGGGG CAATTTCCCG CAGACCTATT CGCACGTCGG CCTGATCACC GCCGCGATGC GCCTGTCGCG GTCGTGGCAG GAGGCATCGT GA
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Protein sequence | MTQPDLDLGV VGNGSFGALV DKHARVVWSC LPTFDGDPTF CALLGPNQQT GGDFAIELED FSSSEQEYLT NTAILRTVLH DSHGGSLEIL DFAPRWRQND RFYRPVSLIR QVRPLAGSPR ITVRARPLAD WGARVPESTW GSNHVRWILP EHVLRLTTDV PVRLVRDGLP FVLNHPVHLI LGVDESLDRS ISGYVQDAFQ RTRDYWREWV RYLSIPLEWQ DAVIRSAITL KLCQYEDSGA IIAAMTTSIP EAPGSVRNWD YRYCWLRDAA FVVRALNRLG ATRTMEQFLG YIFNLASNDG TLQPLYGIGF EAKLDEDEVP SLSGYRGMGP VRRGNLAWVQ RQHDVYGSVV LASTQLFFDR RLQDPGDAHT FARLEPLGEQ AFALHDVPDA GLWEFRGRTE VHTYTSAMCW AACDRLCKIA VRLKRDDRAR YWRERADTIH ARIMAEAWSE ERGHFTDTFG GHRLDASLLL LADIGFIDAM DARFVATVEA IGRDLKHGNS LYRYVAPDDF GEPETSFTIC TFWYIDALAA IGRMEEAREM FELLLKQRNH LGLLSEDLAF DSGEAWGNFP QTYSHVGLIT AAMRLSRSWQ EAS
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