Gene Smal_3153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3153 
Symbol 
ID6476124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3531108 
End bp3531866 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content68% 
IMG OID642732349 
ProductHAD-superfamily hydrolase, subfamily IIB 
Protein accessionYP_002029535 
Protein GI194366925 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1877] Trehalose-6-phosphatase 
TIGRFAM ID[TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAC CGCTCCCCCT GCGTCCGCCA CCTCCATTGC TGGACGATGC CTGCGCGTTG 
TTCCTCGATG TTGATGGCAC CCTGATCGAA TTCGCTGCAC GCCCGGATGC CGTGCAGCTG
CTGCCCGATG TGCGCGAAGC CATCGGCCGC ATCAGCGACC GCCTGGAAGG TGCCGTGGCA
CTGGTCAGTG GCCGCCCGCT CGAGCAACTG GACCAGTTGT TCGCTCCGCT GCAGCTTCCC
GCCGCCGGCC TGCATGGCCA CGAACTGCGT GGCGAGGATG GTCGCGTGCT GCGCGACACG
CATGATGACG ACACCGCCGA CTGGCTGCAT GCGCTGCACC AGCAGGCAAT GCGTTTCGCA
CATGGGCACC CCGGCGTGCT GGTGGAGGAC AAGGGCGTCG GCCTGGCCCT GCACTGGCGC
GGCGCACCGA ACGCAGCGGC CGATGTGCGC GCCTTTGCCA ACCGCCACCT GCGCGGTCGC
AGCAGCCATC GCCTGCAACC CGGCGACCAT GTGGTCGAGT TCGTGCCGGT CGGCTCCGAC
AAGGGGCGCG CGGTGCGACG GATGATGCAG TACCTGCCGT TCCGTGGCCG GCTGCCCGTG
TTCATGGGGG ACGACCTCAC CGATGAGTTC GGCTTTGACG CCGCCAATGG CCAGCATGGC
TGGAGTGTGC TGGTGGGTGA ACGCGAACCC AGCGCGGCGG TGTTCGCACT GCCCGACATA
CGCAGCGTGC ACGCCTGGCT GCGTGAGAAT GCCTATTGA
 
Protein sequence
MAEPLPLRPP PPLLDDACAL FLDVDGTLIE FAARPDAVQL LPDVREAIGR ISDRLEGAVA 
LVSGRPLEQL DQLFAPLQLP AAGLHGHELR GEDGRVLRDT HDDDTADWLH ALHQQAMRFA
HGHPGVLVED KGVGLALHWR GAPNAAADVR AFANRHLRGR SSHRLQPGDH VVEFVPVGSD
KGRAVRRMMQ YLPFRGRLPV FMGDDLTDEF GFDAANGQHG WSVLVGEREP SAAVFALPDI
RSVHAWLREN AY