Gene Smal_3124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3124 
SymbolruvB 
ID6476024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3492617 
End bp3493657 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content68% 
IMG OID642732320 
ProductHolliday junction DNA helicase RuvB 
Protein accessionYP_002029506 
Protein GI194366896 
COG category[L] Replication, recombination and repair 
COG ID[COG2255] Holliday junction resolvasome, helicase subunit 
TIGRFAM ID[TIGR00635] Holliday junction DNA helicase, RuvB subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG ACCGCATCAT CGGCGCCGGC GCCACCCGCG AGGATGACGC CGCCGACGCC 
AGCATCCGCC CCAAGCGCCT TGCCGACTAC CTCGGCCAGG TGCCGGTGCG CGAGCAGATG
GAGATCTACA TCCAGGCGGC CAAGGGGCGT GGCGACGCGC TGGACCACGT GCTGATCTTC
GGGCCGCCCG GCCTGGGCAA GACCACGCTC AGCCATGTCA TCGCCAACGA ACTGGGCGTG
GCCCTGCGGG TGACCTCCGG CCCGGTGATC GAAAAGGCCG GCGACCTGGC CGCGCTGCTG
ACCAACCTGC AGCCGCACGA TGTGCTGTTC ATCGACGAAA TCCACCGCCT GTCGCCGGTG
GTCGAGGAAG TGCTGTACCC GGCGATGGAA GATTTCCAGA TCGACATCAT GATCGGCGAG
GGCCCCGCCG CCCGCTCGAT CAAGATCGAC CTGCCGCCGT TCACCCTGAT CGGTGCCACC
ACCCGTGCCG GCCTGCTGAC AGCGCCGCTG CGCGACCGCT TCGGCATCGT CCAGCGCCTG
GAGTTCTACA GCGTCGAGGA GCTGACCCGG ATCGTGCGCC GTTCGGCTGC GATCCTGGCC
ATCGACTGCA CCGCCGATGG GGCAGGGGAG ATCGCGCGTC GCGCGCGTGG CACCCCGCGT
ATCGCCAACC GCCTGCTGCG CCGCGTGCGT GACTATGCGC AGGTGAAGGC CGGCGGCCAC
ATCGACGAGG CCGTGGCCCA GGCTGCGATG AAGATGCTCA AGGTCGACCC GGAAGGCTTC
GACGAGCTCG ATCGTCGCCT GCTCAAGACC ATGGTCGACT ACTTCGATGG CGGCCCGGTC
GGCATCGAAT CGCTTGCTGC GGCGCTGTCT GAAGAGCGCG GCACGCTGGA AGACGTGGTC
GAGCCGTACC TGATCCAGCA GGGCTTCCTG GTGCGCACCG CGCGTGGCCG CATGGCCACC
CACAAGGCCT ACCGGCACAT GGGCCTGAAG CCCAAGAACC CGCCGCAGGA CCTGTTCGCC
GAGGTTCCCG ATGTCGGTTG A
 
Protein sequence
MTDDRIIGAG ATREDDAADA SIRPKRLADY LGQVPVREQM EIYIQAAKGR GDALDHVLIF 
GPPGLGKTTL SHVIANELGV ALRVTSGPVI EKAGDLAALL TNLQPHDVLF IDEIHRLSPV
VEEVLYPAME DFQIDIMIGE GPAARSIKID LPPFTLIGAT TRAGLLTAPL RDRFGIVQRL
EFYSVEELTR IVRRSAAILA IDCTADGAGE IARRARGTPR IANRLLRRVR DYAQVKAGGH
IDEAVAQAAM KMLKVDPEGF DELDRRLLKT MVDYFDGGPV GIESLAAALS EERGTLEDVV
EPYLIQQGFL VRTARGRMAT HKAYRHMGLK PKNPPQDLFA EVPDVG