Gene Smal_3116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3116 
Symbol 
ID6476016 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3485948 
End bp3486649 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content67% 
IMG OID642732312 
ProductRadical SAM domain protein 
Protein accessionYP_002029498 
Protein GI194366888 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0602] Organic radical activating enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.353505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.670144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG TTACCCCGTC CAGCGCCGCC GCCACACCCA GCGAGATCGT GCAGTCGCCG 
CTGCCACGCC TGAAGATCAC CGAGATCTTC ACCTCGCTGC AGGGCGAAGC CGATACCGCC
GGCTGGCCGA CCGTGTTCGT GCGCCTGACC GGCTGCCCGC TGCGCTGCCA GTACTGCGAC
ACCGCCTATG CCTTCCACGG CGGCACCTGG TGGGACATCG ACGACATCGT GGCCGAGGTG
CTGGCCCAGG GCGTGCGCCA TGTCTGCGTG ACCGGTGGCG AGCCGCTGGC ACAGAAGCGC
TGCCTGGTGC TGCTGCAGAA GCTGTGCGAT GCCGGTATGG ACGTCTCGCT GGAAACGTCC
GGCGCACTGG ACGTCAGCGC AGTGGACCCG CGCGTGTCGC GCGTGGTCGA CATCAAGACC
CCGGGTTCGG CCGAAGCCGC GCGCAACCGC CTGGAAAACC TGCCGCTGCT GACCGCGCGC
GACCAGATCA AGTTCGTCAT CTGCAGCCGT GAGGACTACG ACTGGGCCAA GGCCATGCTG
GCCGAGCACG ATCTGGTGAA GCGTTGCACC GTGTTCTTCT CGCCGAGCAA AGGCGAGATC
ACCGCGCGCC AGCTGGCCGA CTGGATCGTC GAAGACCGGC TGCCGGTGCG CTTCCAGATG
CAGTTGCATA AAATCCTGTG GAACGACGAA CCGGGCCGAT GA
 
Protein sequence
MTAVTPSSAA ATPSEIVQSP LPRLKITEIF TSLQGEADTA GWPTVFVRLT GCPLRCQYCD 
TAYAFHGGTW WDIDDIVAEV LAQGVRHVCV TGGEPLAQKR CLVLLQKLCD AGMDVSLETS
GALDVSAVDP RVSRVVDIKT PGSAEAARNR LENLPLLTAR DQIKFVICSR EDYDWAKAML
AEHDLVKRCT VFFSPSKGEI TARQLADWIV EDRLPVRFQM QLHKILWNDE PGR