Gene Smal_3093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3093 
Symbol 
ID6475992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3456463 
End bp3458508 
Gene Length2046 bp 
Protein Length681 aa 
Translation table11 
GC content69% 
IMG OID642732288 
Producthelicase c2 
Protein accessionYP_002029475 
Protein GI194366865 
COG category[L] Replication, recombination and repair
[K] Transcription 
COG ID[COG1199] Rad3-related DNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.649657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACC TTGTCCATGC CAGCCGCGAA GCCCTCAGCG ACGGCGGCGC GCTCGCCTCG 
CACCTGGATG CCTTCGTCCC GCGTCCCGCA CAGCTGCGCC TGACCGAAGC GATCGCCGAC
GCGTTGCAGC AGCGTGATCT GTTGCTGGCC GAAGCCGGTA CCGGCACCGG CAAGACCTTC
GCCTATCTGG TGCCGGTGCT GCTGTCCGGG CTGCGTACCA TCATCTCCAC CGGCACCCGT
GCGCTGCAGG ACCAGCTCTA CCACCGCGAT CTGCCGCGCG TGCGCCAGGC GCTCGGGGTC
GGCCTGCGCA GTGCGCTGCT GAAGGGGCGT GCGAATTACC TGTGCCGCTA CCGCCTGCAG
CAGGCGCGTG GAGAGCCGCG TTTTTCCAGC CCCGAACAGG CAGCGCAGTT CCAGCGGATC
CTGGCCTGGT CCGGTCGCTC GGAGTTCGGT GACATCGCCG AGCTCGACGG GTTGGCCGAC
GACTCCCCAT TGCTGCCGAT GGTCACTTCC ACTGTCGACA ACTGCCTGGG CACCGATTGC
CCGTTCTGGG ATGACTGCTT CGTGGTGCGC GCGCGGCAAC GCGCGCAGGC CGCCGATGTG
GTGGTGGTCA ACCATCACCT GCTGCTGGCC GATCTGGCGC TGAAGCAGGA CGGCTTCGGT
GAGCTGTTGC CCGGTGCACA GGCCTTCGTC ATCGACGAGG CGCATCAGCT GCCCGAATTG
GCCGCGCAGT TTTTTGGCGA AGGCTTCGGC ATGCGCCCGT GGCAGGAGCT GGGACGCGAC
TGCCTGGCCG AAGCACGTGG CGTGGGTGGC GCACAGTCGG CCCTGCAGGA GCCGGTCGAT
CAGCTGCAGC AGGCGCTGCT GGCGTTGCGA TCGGCGATGG AAGGGCTGCC GTCGCGTGGC
ACGCAGTGGC GTGCGTTGGC GATGCCGCAG GTACGTGACG GCTTCGATAC GGTGATGGCG
GGCCTGGTGA TGCTGGAGCA GGCACTGCAG CCGCTGCGCG AAGCGGCGGC CGGCCTGGAT
GCCTGCCATG CGCGGGCGCG CGAGGCGGTC TCGCGGCTCA GCCGCTGGCT GGGCGATGAC
GAACCCACTC TCGATTTCGA CACCGATCCG TCGGAAGCGA ACAGTGCGGC CGATGTGCTC
TGGTACGAGC TTACGCCGCG TGGTTTCCGT TGCCAGCGCA CGCCGATGGA TGTGTCCGGT
CCGTTGCGTG AGCATCGCGA GCGCAGCCGT GCCGCGTGGA TCTTCACTTC GGCAACGCTG
ACCGTGGGCG GTGGTTTCGA TCACATCGCC ACCCGCCTGG GCCTGGACGA TCCGCACACG
CTGGTGCAGC CGAGTCCGTT CAACTGGCCT GAGCAGGCGC TGTGCTACAT GCCCGAGGGC
CTGCCCGATC CCGCCGCGCG CGGTTTCGGT ACCGCACTGA TCCAGAGCCT GCGGCCAGTG
TTGCAGGCGT CGCAGGGCAG GGCATTCCTG CTGTTTGCTT CGCATCGCGC CCTGCGTGAG
GCGGCCGAGG CATTGCGCGA CGGGCCATGG CCGTTGTTCG TGCAGGGCGA GGCGCCACGC
GCGACGCTGC TGCAGCGCTT CCGCGAATCC GGCAACGGCG TGCTGCTCGG CTCGGCCAGC
TTCCGCGAGG GTGTGGACGT GGTCGGCGAA GCGCTGAGCG TGGTGATGAT CGACAAGCTG
CCGTTCGCGG CGCCGGATGA CCCGGTGTAC GAGGCGCGGT TGGAGGCGAT CCGCAGCCAG
GGGGGCAACC CGTTCCGCGA CGAGCAGTTG CCTCAGGCCG TGATCGCGCT GAAGCAGGGC
GTCGGCCGCC TGATCCGCAG TGAGAGCGAT CGTGGCGTAC TGGTGCTGTG CGACCCGCGC
CTGCTCAACC GGGGCTATGG CCGGGTCTTC CTCGATTCGC TGCCGCCGTT CCGGCGTACC
CGCAGCCTGG CCGATGTGCA GGCCTTCTTT ACGCCACAAT GGGCACCCGT GGCCGATGCT
GCTGCTCCGT CCGCTGTTGC GGCGGGCCCG CAACCGGCAC CCGGCGCCAC GTTCCCCCTG
TTCTGA
 
Protein sequence
MSDLVHASRE ALSDGGALAS HLDAFVPRPA QLRLTEAIAD ALQQRDLLLA EAGTGTGKTF 
AYLVPVLLSG LRTIISTGTR ALQDQLYHRD LPRVRQALGV GLRSALLKGR ANYLCRYRLQ
QARGEPRFSS PEQAAQFQRI LAWSGRSEFG DIAELDGLAD DSPLLPMVTS TVDNCLGTDC
PFWDDCFVVR ARQRAQAADV VVVNHHLLLA DLALKQDGFG ELLPGAQAFV IDEAHQLPEL
AAQFFGEGFG MRPWQELGRD CLAEARGVGG AQSALQEPVD QLQQALLALR SAMEGLPSRG
TQWRALAMPQ VRDGFDTVMA GLVMLEQALQ PLREAAAGLD ACHARAREAV SRLSRWLGDD
EPTLDFDTDP SEANSAADVL WYELTPRGFR CQRTPMDVSG PLREHRERSR AAWIFTSATL
TVGGGFDHIA TRLGLDDPHT LVQPSPFNWP EQALCYMPEG LPDPAARGFG TALIQSLRPV
LQASQGRAFL LFASHRALRE AAEALRDGPW PLFVQGEAPR ATLLQRFRES GNGVLLGSAS
FREGVDVVGE ALSVVMIDKL PFAAPDDPVY EARLEAIRSQ GGNPFRDEQL PQAVIALKQG
VGRLIRSESD RGVLVLCDPR LLNRGYGRVF LDSLPPFRRT RSLADVQAFF TPQWAPVADA
AAPSAVAAGP QPAPGATFPL F