Gene Smal_3074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3074 
Symbol 
ID6475973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3434604 
End bp3435047 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content70% 
IMG OID642732269 
Productprotein of unknown function DUF107 
Protein accessionYP_002029456 
Protein GI194366846 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.091218 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGGG AAGTCGTAGG CTGGGGCGCC CTGGCACTGC TGCTGTTCGC GGCCGAGGCG 
CTGGCACCGG GGGCGTTCAT GCTGTGGATC GGCATCGGCG CGGCGGCGGT GTTCGTGCTG
GTGGCGGTGT TCGGCGATAT CCCGCTGCTG TGGCAGGTGG TTGCCTTCGT GCTGTTGAGC
GTTGTCTCGA TCCAATGCTA CCGGCGCTGG GGGCGGCCCC GCGCCCGGCC CAGCGACGCG
CCGCTGCTCA ACCGCCGCAC GGAACAACTG ATCGGCCGGG TGGTGGCACT GCAGCAGGGG
ATCGTTGATG GCCATGGGCG GGTCAGCATC GACGACGCGT CCTGGCAGGT GACTGGTCCG
GAACTGCCTG CAGGCGCGTG GGTGAAGGTG CTCAGCGTGC AGGGCACGGT GCTGGTGGTC
GAGGCCGCAG GCCGCCCCCT GTAG
 
Protein sequence
MRWEVVGWGA LALLLFAAEA LAPGAFMLWI GIGAAAVFVL VAVFGDIPLL WQVVAFVLLS 
VVSIQCYRRW GRPRARPSDA PLLNRRTEQL IGRVVALQQG IVDGHGRVSI DDASWQVTGP
ELPAGAWVKV LSVQGTVLVV EAAGRPL